Gene : Medtr4g097520 M. truncatula Mt4.0v1
Defline:  (1 of 209) PF00847 - AP2 domain (AP2) Description:  AP2-like ethylene-responsive transcription factor
Genomic Order:  5096 Name:  ? Medtr4g097520
Secondary Identifier:  ? PAC:31108521
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g097520 0.5kb upstream 0.5kb upstream 4242 true chr4: 40187819-40192060 Medicago truncatula
Medtr4g097520 0.5kb upstream 0.5kb upstream 500 false chr4: 40187819-40188318 Medicago truncatula
Medtr4g097520 0.5kb downstream 0.5kb downstream 4242 true chr4: 40188319-40192560 Medicago truncatula
Medtr4g097520 0.5kb downstream 0.5kb downstream 500 false chr4: 40192061-40192560 Medicago truncatula
Medtr4g097520 1.0kb upstream 1.0kb upstream 4742 true chr4: 40187319-40192060 Medicago truncatula
Medtr4g097520 1.0kb upstream 1.0kb upstream 1000 false chr4: 40187319-40188318 Medicago truncatula
Medtr4g097520 1.0kb downstream 1.0kb downstream 4742 true chr4: 40188319-40193060 Medicago truncatula
Medtr4g097520 1.0kb downstream 1.0kb downstream 1000 false chr4: 40192061-40193060 Medicago truncatula
Medtr4g097520 2.0kb upstream 2.0kb upstream 5742 true chr4: 40186319-40192060 Medicago truncatula
Medtr4g097520 2.0kb upstream 2.0kb upstream 2000 false chr4: 40186319-40188318 Medicago truncatula
Medtr4g097520 2.0kb downstream 2.0kb downstream 5742 true chr4: 40188319-40194060 Medicago truncatula
Medtr4g097520 2.0kb downstream 2.0kb downstream 2000 false chr4: 40192061-40194060 Medicago truncatula
Medtr4g097520 5.0kb upstream 5.0kb upstream 8742 true chr4: 40183319-40192060 Medicago truncatula
Medtr4g097520 5.0kb upstream 5.0kb upstream 5000 false chr4: 40183319-40188318 Medicago truncatula
Medtr4g097520 5.0kb downstream 5.0kb downstream 8742 true chr4: 40188319-40197060 Medicago truncatula
Medtr4g097520 5.0kb downstream 5.0kb downstream 5000 false chr4: 40192061-40197060 Medicago truncatula
Medtr4g097520 10.0kb upstream 10.0kb upstream 13742 true chr4: 40178319-40192060 Medicago truncatula
Medtr4g097520 10.0kb upstream 10.0kb upstream 10000 false chr4: 40178319-40188318 Medicago truncatula
Medtr4g097520 10.0kb downstream 10.0kb downstream 13742 true chr4: 40188319-40202060 Medicago truncatula
Medtr4g097520 10.0kb downstream 10.0kb downstream 10000 false chr4: 40192061-40202060 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308902 5265 Fabidae View MSA
124069509 5270 Rosid View MSA
123749531 5271 Pentapetalae View MSA
122794764 5272 Eudicot View MSA
122048323 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.23        
cufflinks 0.376        
cufflinks 0.556        
cufflinks 0.746        
cufflinks 0.5        
cufflinks 0.092     Low Low
cufflinks 1.097       High
cufflinks 0.407        
cufflinks 0.835        

0 Strain