Gene : Medtr4g097220 M. truncatula Mt4.0v1
Defline:  (1 of 34) PF14009 - Domain of unknown function (DUF4228) (DUF4228) Description:  DUF4228 domain protein
Genomic Order:  5077 Name:  ? Medtr4g097220
Secondary Identifier:  ? PAC:31112620
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g097220 0.5kb upstream 0.5kb upstream 3888 true chr4: 40060326-40064213 Medicago truncatula
Medtr4g097220 0.5kb upstream 0.5kb upstream 500 false chr4: 40063714-40064213 Medicago truncatula
Medtr4g097220 0.5kb downstream 0.5kb downstream 3888 true chr4: 40059826-40063713 Medicago truncatula
Medtr4g097220 0.5kb downstream 0.5kb downstream 500 false chr4: 40059826-40060325 Medicago truncatula
Medtr4g097220 1.0kb upstream 1.0kb upstream 4388 true chr4: 40060326-40064713 Medicago truncatula
Medtr4g097220 1.0kb upstream 1.0kb upstream 1000 false chr4: 40063714-40064713 Medicago truncatula
Medtr4g097220 1.0kb downstream 1.0kb downstream 4388 true chr4: 40059326-40063713 Medicago truncatula
Medtr4g097220 1.0kb downstream 1.0kb downstream 1000 false chr4: 40059326-40060325 Medicago truncatula
Medtr4g097220 2.0kb upstream 2.0kb upstream 5388 true chr4: 40060326-40065713 Medicago truncatula
Medtr4g097220 2.0kb upstream 2.0kb upstream 2000 false chr4: 40063714-40065713 Medicago truncatula
Medtr4g097220 2.0kb downstream 2.0kb downstream 5388 true chr4: 40058326-40063713 Medicago truncatula
Medtr4g097220 2.0kb downstream 2.0kb downstream 2000 false chr4: 40058326-40060325 Medicago truncatula
Medtr4g097220 5.0kb upstream 5.0kb upstream 8388 true chr4: 40060326-40068713 Medicago truncatula
Medtr4g097220 5.0kb upstream 5.0kb upstream 5000 false chr4: 40063714-40068713 Medicago truncatula
Medtr4g097220 5.0kb downstream 5.0kb downstream 8388 true chr4: 40055326-40063713 Medicago truncatula
Medtr4g097220 5.0kb downstream 5.0kb downstream 5000 false chr4: 40055326-40060325 Medicago truncatula
Medtr4g097220 10.0kb upstream 10.0kb upstream 13388 true chr4: 40060326-40073713 Medicago truncatula
Medtr4g097220 10.0kb upstream 10.0kb upstream 10000 false chr4: 40063714-40073713 Medicago truncatula
Medtr4g097220 10.0kb downstream 10.0kb downstream 13388 true chr4: 40050326-40063713 Medicago truncatula
Medtr4g097220 10.0kb downstream 10.0kb downstream 10000 false chr4: 40050326-40060325 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301178 5265 Fabidae View MSA
124068874 5270 Rosid View MSA
123747430 5271 Pentapetalae View MSA
122787530 5272 Eudicot View MSA
122043881 5273 Angiosperm View MSA
121349763 5274 Embryophyte View MSA
123381433 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.237       High
cufflinks 0.249        
cufflinks 0.159       Low
cufflinks 3.182        
cufflinks 0.291        
cufflinks 3.142        
cufflinks 5.612       High
cufflinks 0.195       Low
cufflinks 2.784        

0 Strain