Gene : Medtr4g097120 M. truncatula Mt4.0v1
Defline:  (1 of 210) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  5070 Name:  ? Medtr4g097120
Secondary Identifier:  ? PAC:31107260
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g097120 0.5kb upstream 0.5kb upstream 5676 true chr4: 40010681-40016356 Medicago truncatula
Medtr4g097120 0.5kb upstream 0.5kb upstream 500 false chr4: 40010681-40011180 Medicago truncatula
Medtr4g097120 0.5kb downstream 0.5kb downstream 5676 true chr4: 40011181-40016856 Medicago truncatula
Medtr4g097120 0.5kb downstream 0.5kb downstream 500 false chr4: 40016357-40016856 Medicago truncatula
Medtr4g097120 1.0kb upstream 1.0kb upstream 6176 true chr4: 40010181-40016356 Medicago truncatula
Medtr4g097120 1.0kb upstream 1.0kb upstream 1000 false chr4: 40010181-40011180 Medicago truncatula
Medtr4g097120 1.0kb downstream 1.0kb downstream 6176 true chr4: 40011181-40017356 Medicago truncatula
Medtr4g097120 1.0kb downstream 1.0kb downstream 1000 false chr4: 40016357-40017356 Medicago truncatula
Medtr4g097120 2.0kb upstream 2.0kb upstream 7176 true chr4: 40009181-40016356 Medicago truncatula
Medtr4g097120 2.0kb upstream 2.0kb upstream 2000 false chr4: 40009181-40011180 Medicago truncatula
Medtr4g097120 2.0kb downstream 2.0kb downstream 7176 true chr4: 40011181-40018356 Medicago truncatula
Medtr4g097120 2.0kb downstream 2.0kb downstream 2000 false chr4: 40016357-40018356 Medicago truncatula
Medtr4g097120 5.0kb upstream 5.0kb upstream 10176 true chr4: 40006181-40016356 Medicago truncatula
Medtr4g097120 5.0kb upstream 5.0kb upstream 5000 false chr4: 40006181-40011180 Medicago truncatula
Medtr4g097120 5.0kb downstream 5.0kb downstream 10176 true chr4: 40011181-40021356 Medicago truncatula
Medtr4g097120 5.0kb downstream 5.0kb downstream 5000 false chr4: 40016357-40021356 Medicago truncatula
Medtr4g097120 10.0kb upstream 10.0kb upstream 15176 true chr4: 40001181-40016356 Medicago truncatula
Medtr4g097120 10.0kb upstream 10.0kb upstream 10000 false chr4: 40001181-40011180 Medicago truncatula
Medtr4g097120 10.0kb downstream 10.0kb downstream 15176 true chr4: 40011181-40026356 Medicago truncatula
Medtr4g097120 10.0kb downstream 10.0kb downstream 10000 false chr4: 40016357-40026356 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299555 5265 Fabidae View MSA
124050394 5270 Rosid View MSA
123748612 5271 Pentapetalae View MSA
122791093 5272 Eudicot View MSA
122046985 5273 Angiosperm View MSA
121347235 5274 Embryophyte View MSA
123380515 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.43        
cufflinks 4.076        
cufflinks 6.28       High
cufflinks 0.24       Low
cufflinks 6.097       High
cufflinks 0.34       Low
cufflinks 0.575        
cufflinks 5.013        
cufflinks 0.402        

0 Strain