Gene : Medtr4g098660 M. truncatula Mt4.0v1
Defline:  (1 of 599) PF13041 - PPR repeat family (PPR_2) Description:  pentatricopeptide (PPR) repeat protein
Genomic Order:  5143 Name:  ? Medtr4g098660
Secondary Identifier:  ? PAC:31110253
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g098660 0.5kb upstream 0.5kb upstream 3249 true chr4: 40676723-40679971 Medicago truncatula
Medtr4g098660 0.5kb upstream 0.5kb upstream 500 false chr4: 40679472-40679971 Medicago truncatula
Medtr4g098660 0.5kb downstream 0.5kb downstream 3249 true chr4: 40676223-40679471 Medicago truncatula
Medtr4g098660 0.5kb downstream 0.5kb downstream 500 false chr4: 40676223-40676722 Medicago truncatula
Medtr4g098660 1.0kb upstream 1.0kb upstream 3749 true chr4: 40676723-40680471 Medicago truncatula
Medtr4g098660 1.0kb upstream 1.0kb upstream 1000 false chr4: 40679472-40680471 Medicago truncatula
Medtr4g098660 1.0kb downstream 1.0kb downstream 3749 true chr4: 40675723-40679471 Medicago truncatula
Medtr4g098660 1.0kb downstream 1.0kb downstream 1000 false chr4: 40675723-40676722 Medicago truncatula
Medtr4g098660 2.0kb upstream 2.0kb upstream 4749 true chr4: 40676723-40681471 Medicago truncatula
Medtr4g098660 2.0kb upstream 2.0kb upstream 2000 false chr4: 40679472-40681471 Medicago truncatula
Medtr4g098660 2.0kb downstream 2.0kb downstream 4749 true chr4: 40674723-40679471 Medicago truncatula
Medtr4g098660 2.0kb downstream 2.0kb downstream 2000 false chr4: 40674723-40676722 Medicago truncatula
Medtr4g098660 5.0kb upstream 5.0kb upstream 7749 true chr4: 40676723-40684471 Medicago truncatula
Medtr4g098660 5.0kb upstream 5.0kb upstream 5000 false chr4: 40679472-40684471 Medicago truncatula
Medtr4g098660 5.0kb downstream 5.0kb downstream 7749 true chr4: 40671723-40679471 Medicago truncatula
Medtr4g098660 5.0kb downstream 5.0kb downstream 5000 false chr4: 40671723-40676722 Medicago truncatula
Medtr4g098660 10.0kb upstream 10.0kb upstream 12749 true chr4: 40676723-40689471 Medicago truncatula
Medtr4g098660 10.0kb upstream 10.0kb upstream 10000 false chr4: 40679472-40689471 Medicago truncatula
Medtr4g098660 10.0kb downstream 10.0kb downstream 12749 true chr4: 40666723-40679471 Medicago truncatula
Medtr4g098660 10.0kb downstream 10.0kb downstream 10000 false chr4: 40666723-40676722 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304299 5265 Fabidae View MSA
124065827 5270 Rosid View MSA
123753301 5271 Pentapetalae View MSA
122789942 5272 Eudicot View MSA
122043539 5273 Angiosperm View MSA
121344903 5274 Embryophyte View MSA
123380125 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.197        
cufflinks 15.249     High  
cufflinks 14.767     High  
cufflinks 0.608        
cufflinks 36.804     High High
cufflinks 0.04     Low Low
cufflinks 0.744        
cufflinks 16.512     High  
cufflinks 0.726        

0 Strain