Gene : Medtr4g098560 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10044:SF133 - MND1-INTERACTING PROTEIN 1 Description:  MND1-interacting protein
Genomic Order:  5133 Name:  ? Medtr4g098560
Secondary Identifier:  ? PAC:31109460
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g098560 0.5kb upstream 0.5kb upstream 4749 true chr4: 40622687-40627435 Medicago truncatula
Medtr4g098560 0.5kb upstream 0.5kb upstream 500 false chr4: 40622687-40623186 Medicago truncatula
Medtr4g098560 0.5kb downstream 0.5kb downstream 4749 true chr4: 40623187-40627935 Medicago truncatula
Medtr4g098560 0.5kb downstream 0.5kb downstream 500 false chr4: 40627436-40627935 Medicago truncatula
Medtr4g098560 1.0kb upstream 1.0kb upstream 5249 true chr4: 40622187-40627435 Medicago truncatula
Medtr4g098560 1.0kb upstream 1.0kb upstream 1000 false chr4: 40622187-40623186 Medicago truncatula
Medtr4g098560 1.0kb downstream 1.0kb downstream 5249 true chr4: 40623187-40628435 Medicago truncatula
Medtr4g098560 1.0kb downstream 1.0kb downstream 1000 false chr4: 40627436-40628435 Medicago truncatula
Medtr4g098560 2.0kb upstream 2.0kb upstream 6249 true chr4: 40621187-40627435 Medicago truncatula
Medtr4g098560 2.0kb upstream 2.0kb upstream 2000 false chr4: 40621187-40623186 Medicago truncatula
Medtr4g098560 2.0kb downstream 2.0kb downstream 6249 true chr4: 40623187-40629435 Medicago truncatula
Medtr4g098560 2.0kb downstream 2.0kb downstream 2000 false chr4: 40627436-40629435 Medicago truncatula
Medtr4g098560 5.0kb upstream 5.0kb upstream 9249 true chr4: 40618187-40627435 Medicago truncatula
Medtr4g098560 5.0kb upstream 5.0kb upstream 5000 false chr4: 40618187-40623186 Medicago truncatula
Medtr4g098560 5.0kb downstream 5.0kb downstream 9249 true chr4: 40623187-40632435 Medicago truncatula
Medtr4g098560 5.0kb downstream 5.0kb downstream 5000 false chr4: 40627436-40632435 Medicago truncatula
Medtr4g098560 10.0kb upstream 10.0kb upstream 14249 true chr4: 40613187-40627435 Medicago truncatula
Medtr4g098560 10.0kb upstream 10.0kb upstream 10000 false chr4: 40613187-40623186 Medicago truncatula
Medtr4g098560 10.0kb downstream 10.0kb downstream 14249 true chr4: 40623187-40637435 Medicago truncatula
Medtr4g098560 10.0kb downstream 10.0kb downstream 10000 false chr4: 40627436-40637435 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303874 5265 Fabidae View MSA
124064892 5270 Rosid View MSA
123750786 5271 Pentapetalae View MSA
122796031 5272 Eudicot View MSA
122045925 5273 Angiosperm View MSA
121349684 5274 Embryophyte View MSA
123427372 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.925     High High
cufflinks 11.963     High  
cufflinks 12.806     High  
cufflinks 6.557       Low
cufflinks 12.144     High  
cufflinks 4.143       Low
cufflinks 10.309     High  
cufflinks 11.342     High  
cufflinks 10.505     High  

0 Strain