Gene : Medtr4g098640 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13527:SF0 - SAYSVFN DOMAIN-CONTAINING PROTEIN 1 Description:  ubiquitin family protein
Genomic Order:  5141 Name:  ? Medtr4g098640
Secondary Identifier:  ? PAC:31108723
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g098640 0.5kb upstream 0.5kb upstream 5250 true chr4: 40656526-40661775 Medicago truncatula
Medtr4g098640 0.5kb upstream 0.5kb upstream 500 false chr4: 40656526-40657025 Medicago truncatula
Medtr4g098640 0.5kb downstream 0.5kb downstream 5250 true chr4: 40657026-40662275 Medicago truncatula
Medtr4g098640 0.5kb downstream 0.5kb downstream 500 false chr4: 40661776-40662275 Medicago truncatula
Medtr4g098640 1.0kb upstream 1.0kb upstream 5750 true chr4: 40656026-40661775 Medicago truncatula
Medtr4g098640 1.0kb upstream 1.0kb upstream 1000 false chr4: 40656026-40657025 Medicago truncatula
Medtr4g098640 1.0kb downstream 1.0kb downstream 5750 true chr4: 40657026-40662775 Medicago truncatula
Medtr4g098640 1.0kb downstream 1.0kb downstream 1000 false chr4: 40661776-40662775 Medicago truncatula
Medtr4g098640 2.0kb upstream 2.0kb upstream 6750 true chr4: 40655026-40661775 Medicago truncatula
Medtr4g098640 2.0kb upstream 2.0kb upstream 2000 false chr4: 40655026-40657025 Medicago truncatula
Medtr4g098640 2.0kb downstream 2.0kb downstream 6750 true chr4: 40657026-40663775 Medicago truncatula
Medtr4g098640 2.0kb downstream 2.0kb downstream 2000 false chr4: 40661776-40663775 Medicago truncatula
Medtr4g098640 5.0kb upstream 5.0kb upstream 9750 true chr4: 40652026-40661775 Medicago truncatula
Medtr4g098640 5.0kb upstream 5.0kb upstream 5000 false chr4: 40652026-40657025 Medicago truncatula
Medtr4g098640 5.0kb downstream 5.0kb downstream 9750 true chr4: 40657026-40666775 Medicago truncatula
Medtr4g098640 5.0kb downstream 5.0kb downstream 5000 false chr4: 40661776-40666775 Medicago truncatula
Medtr4g098640 10.0kb upstream 10.0kb upstream 14750 true chr4: 40647026-40661775 Medicago truncatula
Medtr4g098640 10.0kb upstream 10.0kb upstream 10000 false chr4: 40647026-40657025 Medicago truncatula
Medtr4g098640 10.0kb downstream 10.0kb downstream 14750 true chr4: 40657026-40671775 Medicago truncatula
Medtr4g098640 10.0kb downstream 10.0kb downstream 10000 false chr4: 40661776-40671775 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307392 5265 Fabidae View MSA
124068007 5270 Rosid View MSA
123749839 5271 Pentapetalae View MSA
122786941 5272 Eudicot View MSA
122045022 5273 Angiosperm View MSA
121347304 5274 Embryophyte View MSA
123428664 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.868        
cufflinks 1.543       Low
cufflinks 2.222        
cufflinks 3.755       High
cufflinks 1.867        
cufflinks 1.476       Low
cufflinks 3.085        
cufflinks 1.882        
cufflinks 2.759        

0 Strain