Gene : Medtr4g103830 M. truncatula Mt4.0v1
Defline:  (1 of 3) 6.3.5.5 - Carbamoyl-phosphate synthase (glutamine-hydrolyzing) / Glutamine-dependent carbamyl phosphate synthetase Description:  carbamoylphosphate synthase small subunit
Genomic Order:  5420 Name:  ? Medtr4g103830
Secondary Identifier:  ? PAC:31106966
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7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula ARGSYNBSUB-PWY Medicago truncatula pathologic  
Mtruncatula ARGSYN-PWY Medicago truncatula pathologic  
Mtruncatula GLUTAMINDEG-PWY Medicago truncatula pathologic  
Mtruncatula PWY0-162 Medicago truncatula pathologic  
Mtruncatula PWY-4984 Medicago truncatula pathologic  
Mtruncatula PWY-5686 Medicago truncatula pathologic  
Mtruncatula PWY-7211 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g103830 0.5kb upstream 0.5kb upstream 5768 true chr4: 42960784-42966551 Medicago truncatula
Medtr4g103830 0.5kb upstream 0.5kb upstream 500 false chr4: 42960784-42961283 Medicago truncatula
Medtr4g103830 0.5kb downstream 0.5kb downstream 5768 true chr4: 42961284-42967051 Medicago truncatula
Medtr4g103830 0.5kb downstream 0.5kb downstream 500 false chr4: 42966552-42967051 Medicago truncatula
Medtr4g103830 1.0kb upstream 1.0kb upstream 6268 true chr4: 42960284-42966551 Medicago truncatula
Medtr4g103830 1.0kb upstream 1.0kb upstream 1000 false chr4: 42960284-42961283 Medicago truncatula
Medtr4g103830 1.0kb downstream 1.0kb downstream 6268 true chr4: 42961284-42967551 Medicago truncatula
Medtr4g103830 1.0kb downstream 1.0kb downstream 1000 false chr4: 42966552-42967551 Medicago truncatula
Medtr4g103830 2.0kb upstream 2.0kb upstream 7268 true chr4: 42959284-42966551 Medicago truncatula
Medtr4g103830 2.0kb upstream 2.0kb upstream 2000 false chr4: 42959284-42961283 Medicago truncatula
Medtr4g103830 2.0kb downstream 2.0kb downstream 7268 true chr4: 42961284-42968551 Medicago truncatula
Medtr4g103830 2.0kb downstream 2.0kb downstream 2000 false chr4: 42966552-42968551 Medicago truncatula
Medtr4g103830 5.0kb upstream 5.0kb upstream 10268 true chr4: 42956284-42966551 Medicago truncatula
Medtr4g103830 5.0kb upstream 5.0kb upstream 5000 false chr4: 42956284-42961283 Medicago truncatula
Medtr4g103830 5.0kb downstream 5.0kb downstream 10268 true chr4: 42961284-42971551 Medicago truncatula
Medtr4g103830 5.0kb downstream 5.0kb downstream 5000 false chr4: 42966552-42971551 Medicago truncatula
Medtr4g103830 10.0kb upstream 10.0kb upstream 15268 true chr4: 42951284-42966551 Medicago truncatula
Medtr4g103830 10.0kb upstream 10.0kb upstream 10000 false chr4: 42951284-42961283 Medicago truncatula
Medtr4g103830 10.0kb downstream 10.0kb downstream 15268 true chr4: 42961284-42976551 Medicago truncatula
Medtr4g103830 10.0kb downstream 10.0kb downstream 10000 false chr4: 42966552-42976551 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313354 5265 Fabidae View MSA
124069141 5270 Rosid View MSA
123739104 5271 Pentapetalae View MSA
122788005 5272 Eudicot View MSA
122046797 5273 Angiosperm View MSA
121347244 5274 Embryophyte View MSA
123423822 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.519        
cufflinks 3.559        
cufflinks 4.087        
cufflinks 2.455        
cufflinks 4.636       High
cufflinks 1.529       Low
cufflinks 2.011        
cufflinks 4.211        
cufflinks 2.695        

0 Strain