Gene : Medtr4g103790 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10894:SF0 - NUCLEOLAR PROTEIN 56 Description:  NOP56-like pre RNA processing ribonucleoprotein
Genomic Order:  5417 Name:  ? Medtr4g103790
Secondary Identifier:  ? PAC:31112665
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g103790 0.5kb upstream 0.5kb upstream 4231 true chr4: 42931144-42935374 Medicago truncatula
Medtr4g103790 0.5kb upstream 0.5kb upstream 500 false chr4: 42931144-42931643 Medicago truncatula
Medtr4g103790 0.5kb downstream 0.5kb downstream 4231 true chr4: 42931644-42935874 Medicago truncatula
Medtr4g103790 0.5kb downstream 0.5kb downstream 500 false chr4: 42935375-42935874 Medicago truncatula
Medtr4g103790 1.0kb upstream 1.0kb upstream 4731 true chr4: 42930644-42935374 Medicago truncatula
Medtr4g103790 1.0kb upstream 1.0kb upstream 1000 false chr4: 42930644-42931643 Medicago truncatula
Medtr4g103790 1.0kb downstream 1.0kb downstream 4731 true chr4: 42931644-42936374 Medicago truncatula
Medtr4g103790 1.0kb downstream 1.0kb downstream 1000 false chr4: 42935375-42936374 Medicago truncatula
Medtr4g103790 2.0kb upstream 2.0kb upstream 5731 true chr4: 42929644-42935374 Medicago truncatula
Medtr4g103790 2.0kb upstream 2.0kb upstream 2000 false chr4: 42929644-42931643 Medicago truncatula
Medtr4g103790 2.0kb downstream 2.0kb downstream 5731 true chr4: 42931644-42937374 Medicago truncatula
Medtr4g103790 2.0kb downstream 2.0kb downstream 2000 false chr4: 42935375-42937374 Medicago truncatula
Medtr4g103790 5.0kb upstream 5.0kb upstream 8731 true chr4: 42926644-42935374 Medicago truncatula
Medtr4g103790 5.0kb upstream 5.0kb upstream 5000 false chr4: 42926644-42931643 Medicago truncatula
Medtr4g103790 5.0kb downstream 5.0kb downstream 8731 true chr4: 42931644-42940374 Medicago truncatula
Medtr4g103790 5.0kb downstream 5.0kb downstream 5000 false chr4: 42935375-42940374 Medicago truncatula
Medtr4g103790 10.0kb upstream 10.0kb upstream 13731 true chr4: 42921644-42935374 Medicago truncatula
Medtr4g103790 10.0kb upstream 10.0kb upstream 10000 false chr4: 42921644-42931643 Medicago truncatula
Medtr4g103790 10.0kb downstream 10.0kb downstream 13731 true chr4: 42931644-42945374 Medicago truncatula
Medtr4g103790 10.0kb downstream 10.0kb downstream 10000 false chr4: 42935375-42945374 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310756 5265 Fabidae View MSA
124068529 5270 Rosid View MSA
123741433 5271 Pentapetalae View MSA
122793119 5272 Eudicot View MSA
122042292 5273 Angiosperm View MSA
121349540 5274 Embryophyte View MSA
123424801 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.375     High  
cufflinks 23.706     High  
cufflinks 26.3     High  
cufflinks 13.63     High Low
cufflinks 51.777     High High
cufflinks 7.732       Low
cufflinks 37.121     High  
cufflinks 28.042     High  
cufflinks 25.791     High  

0 Strain