Gene : Medtr4g104030 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11349:SF44 - NUCLEOSIDE DIPHOSPHATE KINASE II, CHLOROPLASTIC Description:  nucleoside diphosphate kinase-like protein
Genomic Order:  5434 Name:  ? Medtr4g104030
Secondary Identifier:  ? PAC:31114678
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21 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY0-162 Medicago truncatula pathologic  
Mtruncatula PWY-6126 Medicago truncatula pathologic  
Mtruncatula PWY-6545 Medicago truncatula pathologic  
Mtruncatula PWY-7176 Medicago truncatula pathologic  
Mtruncatula PWY-7184 Medicago truncatula pathologic  
Mtruncatula PWY-7196 Medicago truncatula pathologic  
Mtruncatula PWY-7197 Medicago truncatula pathologic  
Mtruncatula PWY-7200 Medicago truncatula pathologic  
Mtruncatula PWY-7205 Medicago truncatula pathologic  
Mtruncatula PWY-7208 Medicago truncatula pathologic  
Mtruncatula PWY-7210 Medicago truncatula pathologic  
Mtruncatula PWY-7211 Medicago truncatula pathologic  
Mtruncatula PWY-7220 Medicago truncatula pathologic  
Mtruncatula PWY-7221 Medicago truncatula pathologic  
Mtruncatula PWY-7222 Medicago truncatula pathologic  
Mtruncatula PWY-7224 Medicago truncatula pathologic  
Mtruncatula PWY-7226 Medicago truncatula pathologic  
Mtruncatula PWY-7227 Medicago truncatula pathologic  
Mtruncatula PWY-7228 Medicago truncatula pathologic  
Mtruncatula PWY-7229 Medicago truncatula pathologic  
Mtruncatula PWY-841 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g104030 0.5kb upstream 0.5kb upstream 5280 true chr4: 43031791-43037070 Medicago truncatula
Medtr4g104030 0.5kb upstream 0.5kb upstream 500 false chr4: 43031791-43032290 Medicago truncatula
Medtr4g104030 0.5kb downstream 0.5kb downstream 5280 true chr4: 43032291-43037570 Medicago truncatula
Medtr4g104030 0.5kb downstream 0.5kb downstream 500 false chr4: 43037071-43037570 Medicago truncatula
Medtr4g104030 1.0kb upstream 1.0kb upstream 5780 true chr4: 43031291-43037070 Medicago truncatula
Medtr4g104030 1.0kb upstream 1.0kb upstream 1000 false chr4: 43031291-43032290 Medicago truncatula
Medtr4g104030 1.0kb downstream 1.0kb downstream 5780 true chr4: 43032291-43038070 Medicago truncatula
Medtr4g104030 1.0kb downstream 1.0kb downstream 1000 false chr4: 43037071-43038070 Medicago truncatula
Medtr4g104030 2.0kb upstream 2.0kb upstream 6780 true chr4: 43030291-43037070 Medicago truncatula
Medtr4g104030 2.0kb upstream 2.0kb upstream 2000 false chr4: 43030291-43032290 Medicago truncatula
Medtr4g104030 2.0kb downstream 2.0kb downstream 6780 true chr4: 43032291-43039070 Medicago truncatula
Medtr4g104030 2.0kb downstream 2.0kb downstream 2000 false chr4: 43037071-43039070 Medicago truncatula
Medtr4g104030 5.0kb upstream 5.0kb upstream 9780 true chr4: 43027291-43037070 Medicago truncatula
Medtr4g104030 5.0kb upstream 5.0kb upstream 5000 false chr4: 43027291-43032290 Medicago truncatula
Medtr4g104030 5.0kb downstream 5.0kb downstream 9780 true chr4: 43032291-43042070 Medicago truncatula
Medtr4g104030 5.0kb downstream 5.0kb downstream 5000 false chr4: 43037071-43042070 Medicago truncatula
Medtr4g104030 10.0kb upstream 10.0kb upstream 14780 true chr4: 43022291-43037070 Medicago truncatula
Medtr4g104030 10.0kb upstream 10.0kb upstream 10000 false chr4: 43022291-43032290 Medicago truncatula
Medtr4g104030 10.0kb downstream 10.0kb downstream 14780 true chr4: 43032291-43047070 Medicago truncatula
Medtr4g104030 10.0kb downstream 10.0kb downstream 10000 false chr4: 43037071-43047070 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300564 5265 Fabidae View MSA
124063920 5270 Rosid View MSA
123743535 5271 Pentapetalae View MSA
122788809 5272 Eudicot View MSA
122050213 5273 Angiosperm View MSA
123428962 5275 Viridiplantae View MSA
121346571 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.914        
cufflinks 13.727     High  
cufflinks 18.114     High High
cufflinks 2.628        
cufflinks 12.854     High  
cufflinks 1.243       Low
cufflinks 1.72       Low
cufflinks 18.844     High High
cufflinks 2.467        

0 Strain