Gene : Medtr4g100640 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10909:SF250 - PEROXISOMAL ACYL-COENZYME A OXIDASE 2 Description:  peroxisomal acyl-coenzyme A oxidase-like protein
Genomic Order:  5231 Name:  ? Medtr4g100640
Secondary Identifier:  ? PAC:31113666
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5136 Medicago truncatula pathologic  
Mtruncatula PWY-561 Medicago truncatula pathologic  
Mtruncatula PWY-6837 Medicago truncatula pathologic  
Mtruncatula PWY-735 Medicago truncatula pathologic  
Mtruncatula PWY-7606 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g100640 0.5kb upstream 0.5kb upstream 7689 true chr4: 41511392-41519080 Medicago truncatula
Medtr4g100640 0.5kb upstream 0.5kb upstream 500 false chr4: 41511392-41511891 Medicago truncatula
Medtr4g100640 0.5kb downstream 0.5kb downstream 7689 true chr4: 41511892-41519580 Medicago truncatula
Medtr4g100640 0.5kb downstream 0.5kb downstream 500 false chr4: 41519081-41519580 Medicago truncatula
Medtr4g100640 1.0kb upstream 1.0kb upstream 8189 true chr4: 41510892-41519080 Medicago truncatula
Medtr4g100640 1.0kb upstream 1.0kb upstream 1000 false chr4: 41510892-41511891 Medicago truncatula
Medtr4g100640 1.0kb downstream 1.0kb downstream 8189 true chr4: 41511892-41520080 Medicago truncatula
Medtr4g100640 1.0kb downstream 1.0kb downstream 1000 false chr4: 41519081-41520080 Medicago truncatula
Medtr4g100640 2.0kb upstream 2.0kb upstream 9189 true chr4: 41509892-41519080 Medicago truncatula
Medtr4g100640 2.0kb upstream 2.0kb upstream 2000 false chr4: 41509892-41511891 Medicago truncatula
Medtr4g100640 2.0kb downstream 2.0kb downstream 9189 true chr4: 41511892-41521080 Medicago truncatula
Medtr4g100640 2.0kb downstream 2.0kb downstream 2000 false chr4: 41519081-41521080 Medicago truncatula
Medtr4g100640 5.0kb upstream 5.0kb upstream 12189 true chr4: 41506892-41519080 Medicago truncatula
Medtr4g100640 5.0kb upstream 5.0kb upstream 5000 false chr4: 41506892-41511891 Medicago truncatula
Medtr4g100640 5.0kb downstream 5.0kb downstream 12189 true chr4: 41511892-41524080 Medicago truncatula
Medtr4g100640 5.0kb downstream 5.0kb downstream 5000 false chr4: 41519081-41524080 Medicago truncatula
Medtr4g100640 10.0kb upstream 10.0kb upstream 17189 true chr4: 41501892-41519080 Medicago truncatula
Medtr4g100640 10.0kb upstream 10.0kb upstream 10000 false chr4: 41501892-41511891 Medicago truncatula
Medtr4g100640 10.0kb downstream 10.0kb downstream 17189 true chr4: 41511892-41529080 Medicago truncatula
Medtr4g100640 10.0kb downstream 10.0kb downstream 10000 false chr4: 41519081-41529080 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309482 5265 Fabidae View MSA
124065660 5270 Rosid View MSA
123739070 5271 Pentapetalae View MSA
122787917 5272 Eudicot View MSA
122045798 5273 Angiosperm View MSA
121345655 5274 Embryophyte View MSA
123428216 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.268     High High
cufflinks 3.728        
cufflinks 5.247        
cufflinks 3.412        
cufflinks 4.06        
cufflinks 2.921        
cufflinks 4.007        
cufflinks 4.084        
cufflinks 3.125        

0 Strain