Gene : Medtr4g100380 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31190:SF30 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 15-RELATED Description:  ethylene response factor
Genomic Order:  5217 Name:  ? Medtr4g100380
Secondary Identifier:  ? PAC:31113862
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g100380 0.5kb upstream 0.5kb upstream 2007 true chr4: 41378394-41380400 Medicago truncatula
Medtr4g100380 0.5kb upstream 0.5kb upstream 500 false chr4: 41379901-41380400 Medicago truncatula
Medtr4g100380 0.5kb downstream 0.5kb downstream 2007 true chr4: 41377894-41379900 Medicago truncatula
Medtr4g100380 0.5kb downstream 0.5kb downstream 500 false chr4: 41377894-41378393 Medicago truncatula
Medtr4g100380 1.0kb upstream 1.0kb upstream 2507 true chr4: 41378394-41380900 Medicago truncatula
Medtr4g100380 1.0kb upstream 1.0kb upstream 1000 false chr4: 41379901-41380900 Medicago truncatula
Medtr4g100380 1.0kb downstream 1.0kb downstream 2507 true chr4: 41377394-41379900 Medicago truncatula
Medtr4g100380 1.0kb downstream 1.0kb downstream 1000 false chr4: 41377394-41378393 Medicago truncatula
Medtr4g100380 2.0kb upstream 2.0kb upstream 3507 true chr4: 41378394-41381900 Medicago truncatula
Medtr4g100380 2.0kb upstream 2.0kb upstream 2000 false chr4: 41379901-41381900 Medicago truncatula
Medtr4g100380 2.0kb downstream 2.0kb downstream 3507 true chr4: 41376394-41379900 Medicago truncatula
Medtr4g100380 2.0kb downstream 2.0kb downstream 2000 false chr4: 41376394-41378393 Medicago truncatula
Medtr4g100380 5.0kb upstream 5.0kb upstream 6507 true chr4: 41378394-41384900 Medicago truncatula
Medtr4g100380 5.0kb upstream 5.0kb upstream 5000 false chr4: 41379901-41384900 Medicago truncatula
Medtr4g100380 5.0kb downstream 5.0kb downstream 6507 true chr4: 41373394-41379900 Medicago truncatula
Medtr4g100380 5.0kb downstream 5.0kb downstream 5000 false chr4: 41373394-41378393 Medicago truncatula
Medtr4g100380 10.0kb upstream 10.0kb upstream 11507 true chr4: 41378394-41389900 Medicago truncatula
Medtr4g100380 10.0kb upstream 10.0kb upstream 10000 false chr4: 41379901-41389900 Medicago truncatula
Medtr4g100380 10.0kb downstream 10.0kb downstream 11507 true chr4: 41368394-41379900 Medicago truncatula
Medtr4g100380 10.0kb downstream 10.0kb downstream 10000 false chr4: 41368394-41378393 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310173 5265 Fabidae View MSA
124072415 5270 Rosid View MSA
123749179 5271 Pentapetalae View MSA
122791440 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 127.337     High  
cufflinks 18.656     High Low
cufflinks 19.156     High Low
cufflinks 405.725     High High
cufflinks 22.914     High  
cufflinks 344.171     High High
cufflinks 116.297     High  
cufflinks 19.352     High Low
cufflinks 113.447     High  

0 Strain