Gene : Medtr4g133410 M. truncatula Mt4.0v1
Defline:  (1 of 493) PF01535 - PPR repeat (PPR) Description:  PPR containing protein, putative
Genomic Order:  7203 Name:  ? Medtr4g133410
Secondary Identifier:  ? PAC:31109098
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g133410 0.5kb upstream 0.5kb upstream 4691 true chr4: 55802637-55807327 Medicago truncatula
Medtr4g133410 0.5kb upstream 0.5kb upstream 500 false chr4: 55806828-55807327 Medicago truncatula
Medtr4g133410 0.5kb downstream 0.5kb downstream 4691 true chr4: 55802137-55806827 Medicago truncatula
Medtr4g133410 0.5kb downstream 0.5kb downstream 500 false chr4: 55802137-55802636 Medicago truncatula
Medtr4g133410 1.0kb upstream 1.0kb upstream 5191 true chr4: 55802637-55807827 Medicago truncatula
Medtr4g133410 1.0kb upstream 1.0kb upstream 1000 false chr4: 55806828-55807827 Medicago truncatula
Medtr4g133410 1.0kb downstream 1.0kb downstream 5191 true chr4: 55801637-55806827 Medicago truncatula
Medtr4g133410 1.0kb downstream 1.0kb downstream 1000 false chr4: 55801637-55802636 Medicago truncatula
Medtr4g133410 2.0kb upstream 2.0kb upstream 6191 true chr4: 55802637-55808827 Medicago truncatula
Medtr4g133410 2.0kb upstream 2.0kb upstream 2000 false chr4: 55806828-55808827 Medicago truncatula
Medtr4g133410 2.0kb downstream 2.0kb downstream 6191 true chr4: 55800637-55806827 Medicago truncatula
Medtr4g133410 2.0kb downstream 2.0kb downstream 2000 false chr4: 55800637-55802636 Medicago truncatula
Medtr4g133410 5.0kb upstream 5.0kb upstream 9191 true chr4: 55802637-55811827 Medicago truncatula
Medtr4g133410 5.0kb upstream 5.0kb upstream 5000 false chr4: 55806828-55811827 Medicago truncatula
Medtr4g133410 5.0kb downstream 5.0kb downstream 9191 true chr4: 55797637-55806827 Medicago truncatula
Medtr4g133410 5.0kb downstream 5.0kb downstream 5000 false chr4: 55797637-55802636 Medicago truncatula
Medtr4g133410 10.0kb upstream 10.0kb upstream 14191 true chr4: 55802637-55816827 Medicago truncatula
Medtr4g133410 10.0kb upstream 10.0kb upstream 10000 false chr4: 55806828-55816827 Medicago truncatula
Medtr4g133410 10.0kb downstream 10.0kb downstream 14191 true chr4: 55792637-55806827 Medicago truncatula
Medtr4g133410 10.0kb downstream 10.0kb downstream 10000 false chr4: 55792637-55802636 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298104 5265 Fabidae View MSA
124071393 5270 Rosid View MSA
123738469 5271 Pentapetalae View MSA
122788721 5272 Eudicot View MSA
122045808 5273 Angiosperm View MSA
121347981 5274 Embryophyte View MSA
123380700 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.721        
cufflinks 1.349        
cufflinks 1.589       High
cufflinks 0.276       Low
cufflinks 1.514       High
cufflinks 0.267       Low
cufflinks 0.437        
cufflinks 1.474        
cufflinks 0.29       Low

0 Strain