Gene : Medtr4g133100 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13026 - NNP-1 PROTEIN NOVEL NUCLEAR PROTEIN 1 NOP52 Description:  nucleolar protein,Nop52 protein
Genomic Order:  7185 Name:  ? Medtr4g133100
Secondary Identifier:  ? PAC:31109639
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g133100 0.5kb upstream 0.5kb upstream 2729 true chr4: 55686810-55689538 Medicago truncatula
Medtr4g133100 0.5kb upstream 0.5kb upstream 500 false chr4: 55686810-55687309 Medicago truncatula
Medtr4g133100 0.5kb downstream 0.5kb downstream 2729 true chr4: 55687310-55690038 Medicago truncatula
Medtr4g133100 0.5kb downstream 0.5kb downstream 500 false chr4: 55689539-55690038 Medicago truncatula
Medtr4g133100 1.0kb upstream 1.0kb upstream 3229 true chr4: 55686310-55689538 Medicago truncatula
Medtr4g133100 1.0kb upstream 1.0kb upstream 1000 false chr4: 55686310-55687309 Medicago truncatula
Medtr4g133100 1.0kb downstream 1.0kb downstream 3229 true chr4: 55687310-55690538 Medicago truncatula
Medtr4g133100 1.0kb downstream 1.0kb downstream 1000 false chr4: 55689539-55690538 Medicago truncatula
Medtr4g133100 2.0kb upstream 2.0kb upstream 4229 true chr4: 55685310-55689538 Medicago truncatula
Medtr4g133100 2.0kb upstream 2.0kb upstream 2000 false chr4: 55685310-55687309 Medicago truncatula
Medtr4g133100 2.0kb downstream 2.0kb downstream 4229 true chr4: 55687310-55691538 Medicago truncatula
Medtr4g133100 2.0kb downstream 2.0kb downstream 2000 false chr4: 55689539-55691538 Medicago truncatula
Medtr4g133100 5.0kb upstream 5.0kb upstream 7229 true chr4: 55682310-55689538 Medicago truncatula
Medtr4g133100 5.0kb upstream 5.0kb upstream 5000 false chr4: 55682310-55687309 Medicago truncatula
Medtr4g133100 5.0kb downstream 5.0kb downstream 7229 true chr4: 55687310-55694538 Medicago truncatula
Medtr4g133100 5.0kb downstream 5.0kb downstream 5000 false chr4: 55689539-55694538 Medicago truncatula
Medtr4g133100 10.0kb upstream 10.0kb upstream 12229 true chr4: 55677310-55689538 Medicago truncatula
Medtr4g133100 10.0kb upstream 10.0kb upstream 10000 false chr4: 55677310-55687309 Medicago truncatula
Medtr4g133100 10.0kb downstream 10.0kb downstream 12229 true chr4: 55687310-55699538 Medicago truncatula
Medtr4g133100 10.0kb downstream 10.0kb downstream 10000 false chr4: 55689539-55699538 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041241 5273 Angiosperm View MSA
122314635 5265 Fabidae View MSA
124064364 5270 Rosid View MSA
123737116 5271 Pentapetalae View MSA
122788031 5272 Eudicot View MSA
121344172 5274 Embryophyte View MSA
123424078 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.14     High  
cufflinks 24.516     High  
cufflinks 25.363     High  
cufflinks 18.25     High  
cufflinks 26.473     High  
cufflinks 6.519       Low
cufflinks 12.902     High  
cufflinks 22.461     High  
cufflinks 19.989     High  

0 Strain