Gene : Medtr4g133945 M. truncatula Mt4.0v1
Defline:  (1 of 5) 3.6.1.13//3.6.1.22//3.6.1.53 - ADP-ribose diphosphatase / ADPR-PPase // NAD(+) diphosphatase / NADP pyrophosphatase // Mn(2+)-dependent ADP-ribose/CDP-alcohol diphosphatase / Mn(2+)-dependent ADP-ribose/CDP-alcohol pyrophosphatase Description:  nudix hydrolase superfamily protein
Genomic Order:  7251 Name:  ? Medtr4g133945
Secondary Identifier:  ? PAC:31113156
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5381 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g133945 0.5kb upstream 0.5kb upstream 4757 true chr4: 56072378-56077134 Medicago truncatula
Medtr4g133945 0.5kb upstream 0.5kb upstream 500 false chr4: 56076635-56077134 Medicago truncatula
Medtr4g133945 0.5kb downstream 0.5kb downstream 4757 true chr4: 56071878-56076634 Medicago truncatula
Medtr4g133945 0.5kb downstream 0.5kb downstream 500 false chr4: 56071878-56072377 Medicago truncatula
Medtr4g133945 1.0kb upstream 1.0kb upstream 5257 true chr4: 56072378-56077634 Medicago truncatula
Medtr4g133945 1.0kb upstream 1.0kb upstream 1000 false chr4: 56076635-56077634 Medicago truncatula
Medtr4g133945 1.0kb downstream 1.0kb downstream 5257 true chr4: 56071378-56076634 Medicago truncatula
Medtr4g133945 1.0kb downstream 1.0kb downstream 1000 false chr4: 56071378-56072377 Medicago truncatula
Medtr4g133945 2.0kb upstream 2.0kb upstream 6257 true chr4: 56072378-56078634 Medicago truncatula
Medtr4g133945 2.0kb upstream 2.0kb upstream 2000 false chr4: 56076635-56078634 Medicago truncatula
Medtr4g133945 2.0kb downstream 2.0kb downstream 6257 true chr4: 56070378-56076634 Medicago truncatula
Medtr4g133945 2.0kb downstream 2.0kb downstream 2000 false chr4: 56070378-56072377 Medicago truncatula
Medtr4g133945 5.0kb upstream 5.0kb upstream 9257 true chr4: 56072378-56081634 Medicago truncatula
Medtr4g133945 5.0kb upstream 5.0kb upstream 5000 false chr4: 56076635-56081634 Medicago truncatula
Medtr4g133945 5.0kb downstream 5.0kb downstream 9257 true chr4: 56067378-56076634 Medicago truncatula
Medtr4g133945 5.0kb downstream 5.0kb downstream 5000 false chr4: 56067378-56072377 Medicago truncatula
Medtr4g133945 10.0kb upstream 10.0kb upstream 14257 true chr4: 56072378-56086634 Medicago truncatula
Medtr4g133945 10.0kb upstream 10.0kb upstream 10000 false chr4: 56076635-56086634 Medicago truncatula
Medtr4g133945 10.0kb downstream 10.0kb downstream 14257 true chr4: 56062378-56076634 Medicago truncatula
Medtr4g133945 10.0kb downstream 10.0kb downstream 10000 false chr4: 56062378-56072377 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314396 5265 Fabidae View MSA
124071917 5270 Rosid View MSA
123746480 5271 Pentapetalae View MSA
122788941 5272 Eudicot View MSA
122049902 5273 Angiosperm View MSA
121347954 5274 Embryophyte View MSA
123428722 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.279        
cufflinks 0.353        
cufflinks 0.464        
cufflinks 0.047     Low Low
cufflinks 0.536        
cufflinks 0.025     Low Low
cufflinks 0.23        
cufflinks 0.348        
cufflinks 0.096     Low  

0 Strain