Gene : Medtr4g133890 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31246:SF5 - MICROTUBULE-ASSOCIATED PROTEIN 70-5 Description:  myosin II heavy chain family protein
Genomic Order:  7242 Name:  ? Medtr4g133890
Secondary Identifier:  ? PAC:31113774
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g133890 0.5kb upstream 0.5kb upstream 5109 true chr4: 56004469-56009577 Medicago truncatula
Medtr4g133890 0.5kb upstream 0.5kb upstream 500 false chr4: 56004469-56004968 Medicago truncatula
Medtr4g133890 0.5kb downstream 0.5kb downstream 5109 true chr4: 56004969-56010077 Medicago truncatula
Medtr4g133890 0.5kb downstream 0.5kb downstream 500 false chr4: 56009578-56010077 Medicago truncatula
Medtr4g133890 1.0kb upstream 1.0kb upstream 5609 true chr4: 56003969-56009577 Medicago truncatula
Medtr4g133890 1.0kb upstream 1.0kb upstream 1000 false chr4: 56003969-56004968 Medicago truncatula
Medtr4g133890 1.0kb downstream 1.0kb downstream 5609 true chr4: 56004969-56010577 Medicago truncatula
Medtr4g133890 1.0kb downstream 1.0kb downstream 1000 false chr4: 56009578-56010577 Medicago truncatula
Medtr4g133890 2.0kb upstream 2.0kb upstream 6609 true chr4: 56002969-56009577 Medicago truncatula
Medtr4g133890 2.0kb upstream 2.0kb upstream 2000 false chr4: 56002969-56004968 Medicago truncatula
Medtr4g133890 2.0kb downstream 2.0kb downstream 6609 true chr4: 56004969-56011577 Medicago truncatula
Medtr4g133890 2.0kb downstream 2.0kb downstream 2000 false chr4: 56009578-56011577 Medicago truncatula
Medtr4g133890 5.0kb upstream 5.0kb upstream 9609 true chr4: 55999969-56009577 Medicago truncatula
Medtr4g133890 5.0kb upstream 5.0kb upstream 5000 false chr4: 55999969-56004968 Medicago truncatula
Medtr4g133890 5.0kb downstream 5.0kb downstream 9609 true chr4: 56004969-56014577 Medicago truncatula
Medtr4g133890 5.0kb downstream 5.0kb downstream 5000 false chr4: 56009578-56014577 Medicago truncatula
Medtr4g133890 10.0kb upstream 10.0kb upstream 14609 true chr4: 55994969-56009577 Medicago truncatula
Medtr4g133890 10.0kb upstream 10.0kb upstream 10000 false chr4: 55994969-56004968 Medicago truncatula
Medtr4g133890 10.0kb downstream 10.0kb downstream 14609 true chr4: 56004969-56019577 Medicago truncatula
Medtr4g133890 10.0kb downstream 10.0kb downstream 10000 false chr4: 56009578-56019577 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313561 5265 Fabidae View MSA
124071128 5270 Rosid View MSA
123749166 5271 Pentapetalae View MSA
122793907 5272 Eudicot View MSA
122048674 5273 Angiosperm View MSA
123428932 5275 Viridiplantae View MSA
121351939 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.821       High
cufflinks 0.066     Low  
cufflinks 0.092        
cufflinks 0.053     Low  
cufflinks 0.207        
cufflinks 0.127     Low  
cufflinks 0.059     Low  
cufflinks 0.063        
cufflinks 0.032     Low Low

0 Strain