Gene : Medtr4g134540 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.7.7.60 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / MEP cytidylyltransferase Description:  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Genomic Order:  7290 Name:  ? Medtr4g134540
Secondary Identifier:  ? PAC:31109911
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7560 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g134540 0.5kb upstream 0.5kb upstream 4864 true chr4: 56350372-56355235 Medicago truncatula
Medtr4g134540 0.5kb upstream 0.5kb upstream 500 false chr4: 56354736-56355235 Medicago truncatula
Medtr4g134540 0.5kb downstream 0.5kb downstream 4864 true chr4: 56349872-56354735 Medicago truncatula
Medtr4g134540 0.5kb downstream 0.5kb downstream 500 false chr4: 56349872-56350371 Medicago truncatula
Medtr4g134540 1.0kb upstream 1.0kb upstream 5364 true chr4: 56350372-56355735 Medicago truncatula
Medtr4g134540 1.0kb upstream 1.0kb upstream 1000 false chr4: 56354736-56355735 Medicago truncatula
Medtr4g134540 1.0kb downstream 1.0kb downstream 5364 true chr4: 56349372-56354735 Medicago truncatula
Medtr4g134540 1.0kb downstream 1.0kb downstream 1000 false chr4: 56349372-56350371 Medicago truncatula
Medtr4g134540 2.0kb upstream 2.0kb upstream 6364 true chr4: 56350372-56356735 Medicago truncatula
Medtr4g134540 2.0kb upstream 2.0kb upstream 2000 false chr4: 56354736-56356735 Medicago truncatula
Medtr4g134540 2.0kb downstream 2.0kb downstream 6364 true chr4: 56348372-56354735 Medicago truncatula
Medtr4g134540 2.0kb downstream 2.0kb downstream 2000 false chr4: 56348372-56350371 Medicago truncatula
Medtr4g134540 5.0kb upstream 5.0kb upstream 9364 true chr4: 56350372-56359735 Medicago truncatula
Medtr4g134540 5.0kb upstream 5.0kb upstream 5000 false chr4: 56354736-56359735 Medicago truncatula
Medtr4g134540 5.0kb downstream 5.0kb downstream 9364 true chr4: 56345372-56354735 Medicago truncatula
Medtr4g134540 5.0kb downstream 5.0kb downstream 5000 false chr4: 56345372-56350371 Medicago truncatula
Medtr4g134540 10.0kb upstream 10.0kb upstream 14364 true chr4: 56350372-56364735 Medicago truncatula
Medtr4g134540 10.0kb upstream 10.0kb upstream 10000 false chr4: 56354736-56364735 Medicago truncatula
Medtr4g134540 10.0kb downstream 10.0kb downstream 14364 true chr4: 56340372-56354735 Medicago truncatula
Medtr4g134540 10.0kb downstream 10.0kb downstream 10000 false chr4: 56340372-56350371 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299722 5265 Fabidae View MSA
124060576 5270 Rosid View MSA
123739794 5271 Pentapetalae View MSA
122786593 5272 Eudicot View MSA
122044265 5273 Angiosperm View MSA
121344499 5274 Embryophyte View MSA
123424809 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.388        
cufflinks 3.477       High
cufflinks 2.362        
cufflinks 0.383        
cufflinks 4.388       High
cufflinks 0.152       Low
cufflinks 0.513        
cufflinks 2.785        
cufflinks 0.77        

0 Strain