Gene : Medtr5g004770 M. truncatula Mt4.0v1
Defline:  (1 of 15) PF03007//PF06974 - Wax ester synthase-like Acyl-CoA acyltransferase domain (WES_acyltransf) // Protein of unknown function (DUF1298) (DUF1298) Description:  O-acyltransferase (WSD1-like) family protein
Genomic Order:  12 Name:  ? Medtr5g004770
Secondary Identifier:  ? PAC:31090651
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g004770 0.5kb upstream 0.5kb upstream 3806 true chr5: 114744-118549 Medicago truncatula
Medtr5g004770 0.5kb upstream 0.5kb upstream 500 false chr5: 114744-115243 Medicago truncatula
Medtr5g004770 0.5kb downstream 0.5kb downstream 3806 true chr5: 115244-119049 Medicago truncatula
Medtr5g004770 0.5kb downstream 0.5kb downstream 500 false chr5: 118550-119049 Medicago truncatula
Medtr5g004770 1.0kb upstream 1.0kb upstream 4306 true chr5: 114244-118549 Medicago truncatula
Medtr5g004770 1.0kb upstream 1.0kb upstream 1000 false chr5: 114244-115243 Medicago truncatula
Medtr5g004770 1.0kb downstream 1.0kb downstream 4306 true chr5: 115244-119549 Medicago truncatula
Medtr5g004770 1.0kb downstream 1.0kb downstream 1000 false chr5: 118550-119549 Medicago truncatula
Medtr5g004770 2.0kb upstream 2.0kb upstream 5306 true chr5: 113244-118549 Medicago truncatula
Medtr5g004770 2.0kb upstream 2.0kb upstream 2000 false chr5: 113244-115243 Medicago truncatula
Medtr5g004770 2.0kb downstream 2.0kb downstream 5306 true chr5: 115244-120549 Medicago truncatula
Medtr5g004770 2.0kb downstream 2.0kb downstream 2000 false chr5: 118550-120549 Medicago truncatula
Medtr5g004770 5.0kb upstream 5.0kb upstream 8306 true chr5: 110244-118549 Medicago truncatula
Medtr5g004770 5.0kb upstream 5.0kb upstream 5000 false chr5: 110244-115243 Medicago truncatula
Medtr5g004770 5.0kb downstream 5.0kb downstream 8306 true chr5: 115244-123549 Medicago truncatula
Medtr5g004770 5.0kb downstream 5.0kb downstream 5000 false chr5: 118550-123549 Medicago truncatula
Medtr5g004770 10.0kb upstream 10.0kb upstream 13306 true chr5: 105244-118549 Medicago truncatula
Medtr5g004770 10.0kb upstream 10.0kb upstream 10000 false chr5: 105244-115243 Medicago truncatula
Medtr5g004770 10.0kb downstream 10.0kb downstream 13306 true chr5: 115244-128549 Medicago truncatula
Medtr5g004770 10.0kb downstream 10.0kb downstream 10000 false chr5: 118550-128549 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311081 5265 Fabidae View MSA
124072353 5270 Rosid View MSA
123749646 5271 Pentapetalae View MSA
122794217 5272 Eudicot View MSA
122046091 5273 Angiosperm View MSA
123428993 5275 Viridiplantae View MSA
121351027 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.767       Low
cufflinks 20.595     High High
cufflinks 18.295     High High
cufflinks 0.747       Low
cufflinks 13.739     High  
cufflinks 1.332        
cufflinks 2.593        
cufflinks 17.95     High High
cufflinks 3.546        

0 Strain