Gene : Medtr5g016450 M. truncatula Mt4.0v1
Description:  maternal effect embryo arrest protein Genomic Order:  864
Name:  ? Medtr5g016450 Secondary Identifier:  ? PAC:31088664
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g016450 0.5kb upstream 0.5kb upstream 1879 true chr5: 5894349-5896227 Medicago truncatula
Medtr5g016450 0.5kb upstream 0.5kb upstream 500 false chr5: 5895728-5896227 Medicago truncatula
Medtr5g016450 0.5kb downstream 0.5kb downstream 1879 true chr5: 5893849-5895727 Medicago truncatula
Medtr5g016450 0.5kb downstream 0.5kb downstream 500 false chr5: 5893849-5894348 Medicago truncatula
Medtr5g016450 1.0kb upstream 1.0kb upstream 2379 true chr5: 5894349-5896727 Medicago truncatula
Medtr5g016450 1.0kb upstream 1.0kb upstream 1000 false chr5: 5895728-5896727 Medicago truncatula
Medtr5g016450 1.0kb downstream 1.0kb downstream 2379 true chr5: 5893349-5895727 Medicago truncatula
Medtr5g016450 1.0kb downstream 1.0kb downstream 1000 false chr5: 5893349-5894348 Medicago truncatula
Medtr5g016450 2.0kb upstream 2.0kb upstream 3379 true chr5: 5894349-5897727 Medicago truncatula
Medtr5g016450 2.0kb upstream 2.0kb upstream 2000 false chr5: 5895728-5897727 Medicago truncatula
Medtr5g016450 2.0kb downstream 2.0kb downstream 3379 true chr5: 5892349-5895727 Medicago truncatula
Medtr5g016450 2.0kb downstream 2.0kb downstream 2000 false chr5: 5892349-5894348 Medicago truncatula
Medtr5g016450 5.0kb upstream 5.0kb upstream 6379 true chr5: 5894349-5900727 Medicago truncatula
Medtr5g016450 5.0kb upstream 5.0kb upstream 5000 false chr5: 5895728-5900727 Medicago truncatula
Medtr5g016450 5.0kb downstream 5.0kb downstream 6379 true chr5: 5889349-5895727 Medicago truncatula
Medtr5g016450 5.0kb downstream 5.0kb downstream 5000 false chr5: 5889349-5894348 Medicago truncatula
Medtr5g016450 10.0kb upstream 10.0kb upstream 11379 true chr5: 5894349-5905727 Medicago truncatula
Medtr5g016450 10.0kb upstream 10.0kb upstream 10000 false chr5: 5895728-5905727 Medicago truncatula
Medtr5g016450 10.0kb downstream 10.0kb downstream 11379 true chr5: 5884349-5895727 Medicago truncatula
Medtr5g016450 10.0kb downstream 10.0kb downstream 10000 false chr5: 5884349-5894348 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299649 5265 Fabidae View MSA
124070606 5270 Rosid View MSA
123741375 5271 Pentapetalae View MSA
122793550 5272 Eudicot View MSA
122048217 5273 Angiosperm View MSA
121345828 5274 Embryophyte View MSA
123380277 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 134.683     High High
cufflinks 0.972       Low
cufflinks 1.625        
cufflinks 91.065     High  
cufflinks 1.068       Low
cufflinks 65.487     High  
cufflinks 102.803     High  
cufflinks 1.768        
cufflinks 45.275     High  

0 Strain