Gene : Medtr5g004880 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR19302:SF37 - GAMMA-TUBULIN COMPLEX COMPONENT 6 Description:  Spc97/Spc98 family of spindle pole body (SBP) component
Genomic Order:  18 Name:  ? Medtr5g004880
Secondary Identifier:  ? PAC:31087806
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g004880 0.5kb upstream 0.5kb upstream 11538 true chr5: 164883-176420 Medicago truncatula
Medtr5g004880 0.5kb upstream 0.5kb upstream 500 false chr5: 175921-176420 Medicago truncatula
Medtr5g004880 0.5kb downstream 0.5kb downstream 11538 true chr5: 164383-175920 Medicago truncatula
Medtr5g004880 0.5kb downstream 0.5kb downstream 500 false chr5: 164383-164882 Medicago truncatula
Medtr5g004880 1.0kb upstream 1.0kb upstream 12038 true chr5: 164883-176920 Medicago truncatula
Medtr5g004880 1.0kb upstream 1.0kb upstream 1000 false chr5: 175921-176920 Medicago truncatula
Medtr5g004880 1.0kb downstream 1.0kb downstream 12038 true chr5: 163883-175920 Medicago truncatula
Medtr5g004880 1.0kb downstream 1.0kb downstream 1000 false chr5: 163883-164882 Medicago truncatula
Medtr5g004880 2.0kb upstream 2.0kb upstream 13038 true chr5: 164883-177920 Medicago truncatula
Medtr5g004880 2.0kb upstream 2.0kb upstream 2000 false chr5: 175921-177920 Medicago truncatula
Medtr5g004880 2.0kb downstream 2.0kb downstream 13038 true chr5: 162883-175920 Medicago truncatula
Medtr5g004880 2.0kb downstream 2.0kb downstream 2000 false chr5: 162883-164882 Medicago truncatula
Medtr5g004880 5.0kb upstream 5.0kb upstream 16038 true chr5: 164883-180920 Medicago truncatula
Medtr5g004880 5.0kb upstream 5.0kb upstream 5000 false chr5: 175921-180920 Medicago truncatula
Medtr5g004880 5.0kb downstream 5.0kb downstream 16038 true chr5: 159883-175920 Medicago truncatula
Medtr5g004880 5.0kb downstream 5.0kb downstream 5000 false chr5: 159883-164882 Medicago truncatula
Medtr5g004880 10.0kb upstream 10.0kb upstream 21038 true chr5: 164883-185920 Medicago truncatula
Medtr5g004880 10.0kb upstream 10.0kb upstream 10000 false chr5: 175921-185920 Medicago truncatula
Medtr5g004880 10.0kb downstream 10.0kb downstream 21038 true chr5: 154883-175920 Medicago truncatula
Medtr5g004880 10.0kb downstream 10.0kb downstream 10000 false chr5: 154883-164882 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041339 5273 Angiosperm View MSA
122305364 5265 Fabidae View MSA
124064972 5270 Rosid View MSA
123740029 5271 Pentapetalae View MSA
122789951 5272 Eudicot View MSA
121345944 5274 Embryophyte View MSA
123428052 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.243        
cufflinks 0.708        
cufflinks 0.708        
cufflinks 0.08       Low
cufflinks 1.076       High
cufflinks 0.075     Low Low
cufflinks 0.182        
cufflinks 0.647        
cufflinks 0.187        

0 Strain