Gene : Medtr5g016350 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22846//PTHR22846:SF41 - WD40 REPEAT PROTEIN Description:  transducin family protein/WD-40 repeat protein
Genomic Order:  860 Name:  ? Medtr5g016350
Secondary Identifier:  ? PAC:31087345
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g016350 0.5kb upstream 0.5kb upstream 11574 true chr5: 5850637-5862210 Medicago truncatula
Medtr5g016350 0.5kb upstream 0.5kb upstream 500 false chr5: 5861711-5862210 Medicago truncatula
Medtr5g016350 0.5kb downstream 0.5kb downstream 11574 true chr5: 5850137-5861710 Medicago truncatula
Medtr5g016350 0.5kb downstream 0.5kb downstream 500 false chr5: 5850137-5850636 Medicago truncatula
Medtr5g016350 1.0kb upstream 1.0kb upstream 12074 true chr5: 5850637-5862710 Medicago truncatula
Medtr5g016350 1.0kb upstream 1.0kb upstream 1000 false chr5: 5861711-5862710 Medicago truncatula
Medtr5g016350 1.0kb downstream 1.0kb downstream 12074 true chr5: 5849637-5861710 Medicago truncatula
Medtr5g016350 1.0kb downstream 1.0kb downstream 1000 false chr5: 5849637-5850636 Medicago truncatula
Medtr5g016350 2.0kb upstream 2.0kb upstream 13074 true chr5: 5850637-5863710 Medicago truncatula
Medtr5g016350 2.0kb upstream 2.0kb upstream 2000 false chr5: 5861711-5863710 Medicago truncatula
Medtr5g016350 2.0kb downstream 2.0kb downstream 13074 true chr5: 5848637-5861710 Medicago truncatula
Medtr5g016350 2.0kb downstream 2.0kb downstream 2000 false chr5: 5848637-5850636 Medicago truncatula
Medtr5g016350 5.0kb upstream 5.0kb upstream 16074 true chr5: 5850637-5866710 Medicago truncatula
Medtr5g016350 5.0kb upstream 5.0kb upstream 5000 false chr5: 5861711-5866710 Medicago truncatula
Medtr5g016350 5.0kb downstream 5.0kb downstream 16074 true chr5: 5845637-5861710 Medicago truncatula
Medtr5g016350 5.0kb downstream 5.0kb downstream 5000 false chr5: 5845637-5850636 Medicago truncatula
Medtr5g016350 10.0kb upstream 10.0kb upstream 21074 true chr5: 5850637-5871710 Medicago truncatula
Medtr5g016350 10.0kb upstream 10.0kb upstream 10000 false chr5: 5861711-5871710 Medicago truncatula
Medtr5g016350 10.0kb downstream 10.0kb downstream 21074 true chr5: 5840637-5861710 Medicago truncatula
Medtr5g016350 10.0kb downstream 10.0kb downstream 10000 false chr5: 5840637-5850636 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310546 5265 Fabidae View MSA
124060920 5270 Rosid View MSA
123745818 5271 Pentapetalae View MSA
122787360 5272 Eudicot View MSA
122041857 5273 Angiosperm View MSA
121347223 5274 Embryophyte View MSA
123428047 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.654        
cufflinks 1.405        
cufflinks 1.394        
cufflinks 0.475       Low
cufflinks 2.119       High
cufflinks 0.261       Low
cufflinks 1.128        
cufflinks 1.369        
cufflinks 0.862        

0 Strain