Gene : Medtr5g005330 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  47
Name:  ? Medtr5g005330 Secondary Identifier:  ? PAC:31086855
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g005330 0.5kb upstream 0.5kb upstream 1774 true chr5: 370640-372413 Medicago truncatula
Medtr5g005330 0.5kb upstream 0.5kb upstream 500 false chr5: 371914-372413 Medicago truncatula
Medtr5g005330 0.5kb downstream 0.5kb downstream 1774 true chr5: 370140-371913 Medicago truncatula
Medtr5g005330 0.5kb downstream 0.5kb downstream 500 false chr5: 370140-370639 Medicago truncatula
Medtr5g005330 1.0kb upstream 1.0kb upstream 2274 true chr5: 370640-372913 Medicago truncatula
Medtr5g005330 1.0kb upstream 1.0kb upstream 1000 false chr5: 371914-372913 Medicago truncatula
Medtr5g005330 1.0kb downstream 1.0kb downstream 2274 true chr5: 369640-371913 Medicago truncatula
Medtr5g005330 1.0kb downstream 1.0kb downstream 1000 false chr5: 369640-370639 Medicago truncatula
Medtr5g005330 2.0kb upstream 2.0kb upstream 3274 true chr5: 370640-373913 Medicago truncatula
Medtr5g005330 2.0kb upstream 2.0kb upstream 2000 false chr5: 371914-373913 Medicago truncatula
Medtr5g005330 2.0kb downstream 2.0kb downstream 3274 true chr5: 368640-371913 Medicago truncatula
Medtr5g005330 2.0kb downstream 2.0kb downstream 2000 false chr5: 368640-370639 Medicago truncatula
Medtr5g005330 5.0kb upstream 5.0kb upstream 6274 true chr5: 370640-376913 Medicago truncatula
Medtr5g005330 5.0kb upstream 5.0kb upstream 5000 false chr5: 371914-376913 Medicago truncatula
Medtr5g005330 5.0kb downstream 5.0kb downstream 6274 true chr5: 365640-371913 Medicago truncatula
Medtr5g005330 5.0kb downstream 5.0kb downstream 5000 false chr5: 365640-370639 Medicago truncatula
Medtr5g005330 10.0kb upstream 10.0kb upstream 11274 true chr5: 370640-381913 Medicago truncatula
Medtr5g005330 10.0kb upstream 10.0kb upstream 10000 false chr5: 371914-381913 Medicago truncatula
Medtr5g005330 10.0kb downstream 10.0kb downstream 11274 true chr5: 360640-371913 Medicago truncatula
Medtr5g005330 10.0kb downstream 10.0kb downstream 10000 false chr5: 360640-370639 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027470 5273 Angiosperm View MSA
122315192 5265 Fabidae View MSA
124061298 5270 Rosid View MSA
123753101 5271 Pentapetalae View MSA
122794224 5272 Eudicot View MSA
121297119 5274 Embryophyte View MSA
123335205 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.131        
cufflinks 1.635        
cufflinks 0.961       Low
cufflinks 12.948     High  
cufflinks 2.07        
cufflinks 33.815     High High
cufflinks 43.485     High High
cufflinks 1.101       Low
cufflinks 23.752     High  

0 Strain