Gene : Medtr5g005160 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11785//PTHR11785:SF366 - AMINO ACID TRANSPORTER Description:  neutral amino acid transporter
Genomic Order:  29 Name:  ? Medtr5g005160
Secondary Identifier:  ? PAC:31089538
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g005160 0.5kb upstream 0.5kb upstream 2734 true chr5: 253317-256050 Medicago truncatula
Medtr5g005160 0.5kb upstream 0.5kb upstream 500 false chr5: 255551-256050 Medicago truncatula
Medtr5g005160 0.5kb downstream 0.5kb downstream 2734 true chr5: 252817-255550 Medicago truncatula
Medtr5g005160 0.5kb downstream 0.5kb downstream 500 false chr5: 252817-253316 Medicago truncatula
Medtr5g005160 1.0kb upstream 1.0kb upstream 3234 true chr5: 253317-256550 Medicago truncatula
Medtr5g005160 1.0kb upstream 1.0kb upstream 1000 false chr5: 255551-256550 Medicago truncatula
Medtr5g005160 1.0kb downstream 1.0kb downstream 3234 true chr5: 252317-255550 Medicago truncatula
Medtr5g005160 1.0kb downstream 1.0kb downstream 1000 false chr5: 252317-253316 Medicago truncatula
Medtr5g005160 2.0kb upstream 2.0kb upstream 4234 true chr5: 253317-257550 Medicago truncatula
Medtr5g005160 2.0kb upstream 2.0kb upstream 2000 false chr5: 255551-257550 Medicago truncatula
Medtr5g005160 2.0kb downstream 2.0kb downstream 4234 true chr5: 251317-255550 Medicago truncatula
Medtr5g005160 2.0kb downstream 2.0kb downstream 2000 false chr5: 251317-253316 Medicago truncatula
Medtr5g005160 5.0kb upstream 5.0kb upstream 7234 true chr5: 253317-260550 Medicago truncatula
Medtr5g005160 5.0kb upstream 5.0kb upstream 5000 false chr5: 255551-260550 Medicago truncatula
Medtr5g005160 5.0kb downstream 5.0kb downstream 7234 true chr5: 248317-255550 Medicago truncatula
Medtr5g005160 5.0kb downstream 5.0kb downstream 5000 false chr5: 248317-253316 Medicago truncatula
Medtr5g005160 10.0kb upstream 10.0kb upstream 12234 true chr5: 253317-265550 Medicago truncatula
Medtr5g005160 10.0kb upstream 10.0kb upstream 10000 false chr5: 255551-265550 Medicago truncatula
Medtr5g005160 10.0kb downstream 10.0kb downstream 12234 true chr5: 243317-255550 Medicago truncatula
Medtr5g005160 10.0kb downstream 10.0kb downstream 10000 false chr5: 243317-253316 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303318 5265 Fabidae View MSA
124068047 5270 Rosid View MSA
123738563 5271 Pentapetalae View MSA
122792232 5272 Eudicot View MSA
122042017 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.509       Low
cufflinks 3.318        
cufflinks 3.66        
cufflinks 1.946        
cufflinks 4.896       High
cufflinks 1.237       Low
cufflinks 1.84        
cufflinks 2.837        
cufflinks 2.116        

0 Strain