Gene : Medtr5g005950 M. truncatula Mt4.0v1
Defline:  (1 of 72) PF03168 - Late embryogenesis abundant protein (LEA_2) Description:  late embryogenesis abundant protein
Genomic Order:  88 Name:  ? Medtr5g005950
Secondary Identifier:  ? PAC:31091943
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g005950 0.5kb upstream 0.5kb upstream 1073 true chr5: 688137-689209 Medicago truncatula
Medtr5g005950 0.5kb upstream 0.5kb upstream 500 false chr5: 688710-689209 Medicago truncatula
Medtr5g005950 0.5kb downstream 0.5kb downstream 1073 true chr5: 687637-688709 Medicago truncatula
Medtr5g005950 0.5kb downstream 0.5kb downstream 500 false chr5: 687637-688136 Medicago truncatula
Medtr5g005950 1.0kb upstream 1.0kb upstream 1573 true chr5: 688137-689709 Medicago truncatula
Medtr5g005950 1.0kb upstream 1.0kb upstream 1000 false chr5: 688710-689709 Medicago truncatula
Medtr5g005950 1.0kb downstream 1.0kb downstream 1573 true chr5: 687137-688709 Medicago truncatula
Medtr5g005950 1.0kb downstream 1.0kb downstream 1000 false chr5: 687137-688136 Medicago truncatula
Medtr5g005950 2.0kb upstream 2.0kb upstream 2573 true chr5: 688137-690709 Medicago truncatula
Medtr5g005950 2.0kb upstream 2.0kb upstream 2000 false chr5: 688710-690709 Medicago truncatula
Medtr5g005950 2.0kb downstream 2.0kb downstream 2573 true chr5: 686137-688709 Medicago truncatula
Medtr5g005950 2.0kb downstream 2.0kb downstream 2000 false chr5: 686137-688136 Medicago truncatula
Medtr5g005950 5.0kb upstream 5.0kb upstream 5573 true chr5: 688137-693709 Medicago truncatula
Medtr5g005950 5.0kb upstream 5.0kb upstream 5000 false chr5: 688710-693709 Medicago truncatula
Medtr5g005950 5.0kb downstream 5.0kb downstream 5573 true chr5: 683137-688709 Medicago truncatula
Medtr5g005950 5.0kb downstream 5.0kb downstream 5000 false chr5: 683137-688136 Medicago truncatula
Medtr5g005950 10.0kb upstream 10.0kb upstream 10573 true chr5: 688137-698709 Medicago truncatula
Medtr5g005950 10.0kb upstream 10.0kb upstream 10000 false chr5: 688710-698709 Medicago truncatula
Medtr5g005950 10.0kb downstream 10.0kb downstream 10573 true chr5: 678137-688709 Medicago truncatula
Medtr5g005950 10.0kb downstream 10.0kb downstream 10000 false chr5: 678137-688136 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300273 5265 Fabidae View MSA
124050602 5270 Rosid View MSA
123743309 5271 Pentapetalae View MSA
122795927 5272 Eudicot View MSA
122049772 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low  
cufflinks 0.018     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.07     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain