Gene : Medtr5g005440 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR15948 - G-PROTEIN COUPLED RECEPTOR 89-RELATED Description:  GPCR-type G protein
Genomic Order:  53 Name:  ? Medtr5g005440
Secondary Identifier:  ? PAC:31088651
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g005440 0.5kb upstream 0.5kb upstream 7319 true chr5: 445749-453067 Medicago truncatula
Medtr5g005440 0.5kb upstream 0.5kb upstream 500 false chr5: 445749-446248 Medicago truncatula
Medtr5g005440 0.5kb downstream 0.5kb downstream 7319 true chr5: 446249-453567 Medicago truncatula
Medtr5g005440 0.5kb downstream 0.5kb downstream 500 false chr5: 453068-453567 Medicago truncatula
Medtr5g005440 1.0kb upstream 1.0kb upstream 7819 true chr5: 445249-453067 Medicago truncatula
Medtr5g005440 1.0kb upstream 1.0kb upstream 1000 false chr5: 445249-446248 Medicago truncatula
Medtr5g005440 1.0kb downstream 1.0kb downstream 7819 true chr5: 446249-454067 Medicago truncatula
Medtr5g005440 1.0kb downstream 1.0kb downstream 1000 false chr5: 453068-454067 Medicago truncatula
Medtr5g005440 2.0kb upstream 2.0kb upstream 8819 true chr5: 444249-453067 Medicago truncatula
Medtr5g005440 2.0kb upstream 2.0kb upstream 2000 false chr5: 444249-446248 Medicago truncatula
Medtr5g005440 2.0kb downstream 2.0kb downstream 8819 true chr5: 446249-455067 Medicago truncatula
Medtr5g005440 2.0kb downstream 2.0kb downstream 2000 false chr5: 453068-455067 Medicago truncatula
Medtr5g005440 5.0kb upstream 5.0kb upstream 11819 true chr5: 441249-453067 Medicago truncatula
Medtr5g005440 5.0kb upstream 5.0kb upstream 5000 false chr5: 441249-446248 Medicago truncatula
Medtr5g005440 5.0kb downstream 5.0kb downstream 11819 true chr5: 446249-458067 Medicago truncatula
Medtr5g005440 5.0kb downstream 5.0kb downstream 5000 false chr5: 453068-458067 Medicago truncatula
Medtr5g005440 10.0kb upstream 10.0kb upstream 16819 true chr5: 436249-453067 Medicago truncatula
Medtr5g005440 10.0kb upstream 10.0kb upstream 10000 false chr5: 436249-446248 Medicago truncatula
Medtr5g005440 10.0kb downstream 10.0kb downstream 16819 true chr5: 446249-463067 Medicago truncatula
Medtr5g005440 10.0kb downstream 10.0kb downstream 10000 false chr5: 453068-463067 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301832 5265 Fabidae View MSA
124062621 5270 Rosid View MSA
123736623 5271 Pentapetalae View MSA
122791514 5272 Eudicot View MSA
122046537 5273 Angiosperm View MSA
121343919 5274 Embryophyte View MSA
123423956 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.01        
cufflinks 5.969        
cufflinks 6.151        
cufflinks 1.112       Low
cufflinks 5.826        
cufflinks 1.137       Low
cufflinks 2.214        
cufflinks 5.349        
cufflinks 1.021       Low

0 Strain