Gene : Medtr5g006310 M. truncatula Mt4.0v1

Defline:  (1 of 1) PTHR12899:SF9 - EXPRESSED PROTEIN Description:  structural constituent of ribosome protein
Genomic Order:  114 Name:  ? Medtr5g006310
Secondary Identifier:  ? PAC:31091383

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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g006310 0.5kb upstream 0.5kb upstream 2350 true chr5: 853906-856255 Medicago truncatula
Medtr5g006310 0.5kb upstream 0.5kb upstream 500 false chr5: 853906-854405 Medicago truncatula
Medtr5g006310 0.5kb downstream 0.5kb downstream 2350 true chr5: 854406-856755 Medicago truncatula
Medtr5g006310 0.5kb downstream 0.5kb downstream 500 false chr5: 856256-856755 Medicago truncatula
Medtr5g006310 1.0kb upstream 1.0kb upstream 2850 true chr5: 853406-856255 Medicago truncatula
Medtr5g006310 1.0kb upstream 1.0kb upstream 1000 false chr5: 853406-854405 Medicago truncatula
Medtr5g006310 1.0kb downstream 1.0kb downstream 2850 true chr5: 854406-857255 Medicago truncatula
Medtr5g006310 1.0kb downstream 1.0kb downstream 1000 false chr5: 856256-857255 Medicago truncatula
Medtr5g006310 2.0kb upstream 2.0kb upstream 3850 true chr5: 852406-856255 Medicago truncatula
Medtr5g006310 2.0kb upstream 2.0kb upstream 2000 false chr5: 852406-854405 Medicago truncatula
Medtr5g006310 2.0kb downstream 2.0kb downstream 3850 true chr5: 854406-858255 Medicago truncatula
Medtr5g006310 2.0kb downstream 2.0kb downstream 2000 false chr5: 856256-858255 Medicago truncatula
Medtr5g006310 5.0kb upstream 5.0kb upstream 6850 true chr5: 849406-856255 Medicago truncatula
Medtr5g006310 5.0kb upstream 5.0kb upstream 5000 false chr5: 849406-854405 Medicago truncatula
Medtr5g006310 5.0kb downstream 5.0kb downstream 6850 true chr5: 854406-861255 Medicago truncatula
Medtr5g006310 5.0kb downstream 5.0kb downstream 5000 false chr5: 856256-861255 Medicago truncatula
Medtr5g006310 10.0kb upstream 10.0kb upstream 11850 true chr5: 844406-856255 Medicago truncatula
Medtr5g006310 10.0kb upstream 10.0kb upstream 10000 false chr5: 844406-854405 Medicago truncatula
Medtr5g006310 10.0kb downstream 10.0kb downstream 11850 true chr5: 854406-866255 Medicago truncatula
Medtr5g006310 10.0kb downstream 10.0kb downstream 10000 false chr5: 856256-866255 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306570 5265 Fabidae View MSA
124063027 5270 Rosid View MSA
123744387 5271 Pentapetalae View MSA
122788355 5272 Eudicot View MSA
122047146 5273 Angiosperm View MSA
121310695 5274 Embryophyte View MSA
123348119 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.26       High
cufflinks 0.242       Low
cufflinks 0.376        
cufflinks 0.756        
cufflinks 0.907        
cufflinks 0.555        
cufflinks 1.419        
cufflinks 0.356        
cufflinks 1.328        

0 Strain