Gene : Medtr5g014070 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12919:SF20 - 28S RIBOSOMAL PROTEIN S16, MITOCHONDRIAL Description:  30S ribosomal S16-like protein
Genomic Order:  717 Name:  ? Medtr5g014070
Secondary Identifier:  ? PAC:31086286
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g014070 0.5kb upstream 0.5kb upstream 4253 true chr5: 4649938-4654190 Medicago truncatula
Medtr5g014070 0.5kb upstream 0.5kb upstream 500 false chr5: 4649938-4650437 Medicago truncatula
Medtr5g014070 0.5kb downstream 0.5kb downstream 4253 true chr5: 4650438-4654690 Medicago truncatula
Medtr5g014070 0.5kb downstream 0.5kb downstream 500 false chr5: 4654191-4654690 Medicago truncatula
Medtr5g014070 1.0kb upstream 1.0kb upstream 4753 true chr5: 4649438-4654190 Medicago truncatula
Medtr5g014070 1.0kb upstream 1.0kb upstream 1000 false chr5: 4649438-4650437 Medicago truncatula
Medtr5g014070 1.0kb downstream 1.0kb downstream 4753 true chr5: 4650438-4655190 Medicago truncatula
Medtr5g014070 1.0kb downstream 1.0kb downstream 1000 false chr5: 4654191-4655190 Medicago truncatula
Medtr5g014070 2.0kb upstream 2.0kb upstream 5753 true chr5: 4648438-4654190 Medicago truncatula
Medtr5g014070 2.0kb upstream 2.0kb upstream 2000 false chr5: 4648438-4650437 Medicago truncatula
Medtr5g014070 2.0kb downstream 2.0kb downstream 5753 true chr5: 4650438-4656190 Medicago truncatula
Medtr5g014070 2.0kb downstream 2.0kb downstream 2000 false chr5: 4654191-4656190 Medicago truncatula
Medtr5g014070 5.0kb upstream 5.0kb upstream 8753 true chr5: 4645438-4654190 Medicago truncatula
Medtr5g014070 5.0kb upstream 5.0kb upstream 5000 false chr5: 4645438-4650437 Medicago truncatula
Medtr5g014070 5.0kb downstream 5.0kb downstream 8753 true chr5: 4650438-4659190 Medicago truncatula
Medtr5g014070 5.0kb downstream 5.0kb downstream 5000 false chr5: 4654191-4659190 Medicago truncatula
Medtr5g014070 10.0kb upstream 10.0kb upstream 13753 true chr5: 4640438-4654190 Medicago truncatula
Medtr5g014070 10.0kb upstream 10.0kb upstream 10000 false chr5: 4640438-4650437 Medicago truncatula
Medtr5g014070 10.0kb downstream 10.0kb downstream 13753 true chr5: 4650438-4664190 Medicago truncatula
Medtr5g014070 10.0kb downstream 10.0kb downstream 10000 false chr5: 4654191-4664190 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299837 5265 Fabidae View MSA
124065829 5270 Rosid View MSA
123738502 5271 Pentapetalae View MSA
122792819 5272 Eudicot View MSA
122051162 5273 Angiosperm View MSA
121348917 5274 Embryophyte View MSA
123426601 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.338       High
cufflinks 0.328        
cufflinks 0.428        
cufflinks 0.344        
cufflinks 0.634        
cufflinks 0.237        
cufflinks 0.216        
cufflinks 0.392        
cufflinks 0.171       Low

0 Strain