Gene : Medtr4g124600 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR15629:SF2 - SH3 DOMAIN-CONTAINING YSC84-LIKE PROTEIN 1 Description:  RING/FYVE/PHD-type zinc finger protein
Genomic Order:  6612 Name:  ? Medtr4g124600
Secondary Identifier:  ? PAC:31113487
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g124600 0.5kb upstream 0.5kb upstream 4440 true chr4: 51595277-51599716 Medicago truncatula
Medtr4g124600 0.5kb upstream 0.5kb upstream 500 false chr4: 51599217-51599716 Medicago truncatula
Medtr4g124600 0.5kb downstream 0.5kb downstream 4440 true chr4: 51594777-51599216 Medicago truncatula
Medtr4g124600 0.5kb downstream 0.5kb downstream 500 false chr4: 51594777-51595276 Medicago truncatula
Medtr4g124600 1.0kb upstream 1.0kb upstream 4940 true chr4: 51595277-51600216 Medicago truncatula
Medtr4g124600 1.0kb upstream 1.0kb upstream 1000 false chr4: 51599217-51600216 Medicago truncatula
Medtr4g124600 1.0kb downstream 1.0kb downstream 4940 true chr4: 51594277-51599216 Medicago truncatula
Medtr4g124600 1.0kb downstream 1.0kb downstream 1000 false chr4: 51594277-51595276 Medicago truncatula
Medtr4g124600 2.0kb upstream 2.0kb upstream 5940 true chr4: 51595277-51601216 Medicago truncatula
Medtr4g124600 2.0kb upstream 2.0kb upstream 2000 false chr4: 51599217-51601216 Medicago truncatula
Medtr4g124600 2.0kb downstream 2.0kb downstream 5940 true chr4: 51593277-51599216 Medicago truncatula
Medtr4g124600 2.0kb downstream 2.0kb downstream 2000 false chr4: 51593277-51595276 Medicago truncatula
Medtr4g124600 5.0kb upstream 5.0kb upstream 8940 true chr4: 51595277-51604216 Medicago truncatula
Medtr4g124600 5.0kb upstream 5.0kb upstream 5000 false chr4: 51599217-51604216 Medicago truncatula
Medtr4g124600 5.0kb downstream 5.0kb downstream 8940 true chr4: 51590277-51599216 Medicago truncatula
Medtr4g124600 5.0kb downstream 5.0kb downstream 5000 false chr4: 51590277-51595276 Medicago truncatula
Medtr4g124600 10.0kb upstream 10.0kb upstream 13940 true chr4: 51595277-51609216 Medicago truncatula
Medtr4g124600 10.0kb upstream 10.0kb upstream 10000 false chr4: 51599217-51609216 Medicago truncatula
Medtr4g124600 10.0kb downstream 10.0kb downstream 13940 true chr4: 51585277-51599216 Medicago truncatula
Medtr4g124600 10.0kb downstream 10.0kb downstream 10000 false chr4: 51585277-51595276 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311551 5265 Fabidae View MSA
124061750 5270 Rosid View MSA
123737814 5271 Pentapetalae View MSA
122792588 5272 Eudicot View MSA
122046278 5273 Angiosperm View MSA
121345874 5274 Embryophyte View MSA
123426176 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.95     High  
cufflinks 9.69     High Low
cufflinks 11.692     High  
cufflinks 23.794     High High
cufflinks 9.45       Low
cufflinks 13.138     High  
cufflinks 20.862     High High
cufflinks 10.325     High  
cufflinks 21.569     High High

0 Strain