Gene : Medtr4g130980 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR32100:SF10 - OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC Description:  fatty-acid desaturase
Genomic Order:  7014 Name:  ? Medtr4g130980
Secondary Identifier:  ? PAC:31108105
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g130980 0.5kb upstream 0.5kb upstream 6716 true chr4: 54616212-54622927 Medicago truncatula
Medtr4g130980 0.5kb upstream 0.5kb upstream 500 false chr4: 54622428-54622927 Medicago truncatula
Medtr4g130980 0.5kb downstream 0.5kb downstream 6716 true chr4: 54615712-54622427 Medicago truncatula
Medtr4g130980 0.5kb downstream 0.5kb downstream 500 false chr4: 54615712-54616211 Medicago truncatula
Medtr4g130980 1.0kb upstream 1.0kb upstream 7216 true chr4: 54616212-54623427 Medicago truncatula
Medtr4g130980 1.0kb upstream 1.0kb upstream 1000 false chr4: 54622428-54623427 Medicago truncatula
Medtr4g130980 1.0kb downstream 1.0kb downstream 7216 true chr4: 54615212-54622427 Medicago truncatula
Medtr4g130980 1.0kb downstream 1.0kb downstream 1000 false chr4: 54615212-54616211 Medicago truncatula
Medtr4g130980 2.0kb upstream 2.0kb upstream 8216 true chr4: 54616212-54624427 Medicago truncatula
Medtr4g130980 2.0kb upstream 2.0kb upstream 2000 false chr4: 54622428-54624427 Medicago truncatula
Medtr4g130980 2.0kb downstream 2.0kb downstream 8216 true chr4: 54614212-54622427 Medicago truncatula
Medtr4g130980 2.0kb downstream 2.0kb downstream 2000 false chr4: 54614212-54616211 Medicago truncatula
Medtr4g130980 5.0kb upstream 5.0kb upstream 11216 true chr4: 54616212-54627427 Medicago truncatula
Medtr4g130980 5.0kb upstream 5.0kb upstream 5000 false chr4: 54622428-54627427 Medicago truncatula
Medtr4g130980 5.0kb downstream 5.0kb downstream 11216 true chr4: 54611212-54622427 Medicago truncatula
Medtr4g130980 5.0kb downstream 5.0kb downstream 5000 false chr4: 54611212-54616211 Medicago truncatula
Medtr4g130980 10.0kb upstream 10.0kb upstream 16216 true chr4: 54616212-54632427 Medicago truncatula
Medtr4g130980 10.0kb upstream 10.0kb upstream 10000 false chr4: 54622428-54632427 Medicago truncatula
Medtr4g130980 10.0kb downstream 10.0kb downstream 16216 true chr4: 54606212-54622427 Medicago truncatula
Medtr4g130980 10.0kb downstream 10.0kb downstream 10000 false chr4: 54606212-54616211 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041454 5273 Angiosperm View MSA
122308123 5265 Fabidae View MSA
124062446 5270 Rosid View MSA
123738012 5271 Pentapetalae View MSA
122787271 5272 Eudicot View MSA
121345501 5274 Embryophyte View MSA
123423794 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.525       Low
cufflinks 23.44     High High
cufflinks 10.49     High  
cufflinks 4.106        
cufflinks 18.719     High High
cufflinks 1.013       Low
cufflinks 2.576        
cufflinks 17.511     High High
cufflinks 1.922        

0 Strain