Gene : Medtr4g125060 M. truncatula Mt4.0v1
Defline:  (1 of 62) PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) Description:  Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein
Genomic Order:  6645 Name:  ? Medtr4g125060
Secondary Identifier:  ? PAC:31108667
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g125060 0.5kb upstream 0.5kb upstream 5151 true chr4: 51877520-51882670 Medicago truncatula
Medtr4g125060 0.5kb upstream 0.5kb upstream 500 false chr4: 51882171-51882670 Medicago truncatula
Medtr4g125060 0.5kb downstream 0.5kb downstream 5151 true chr4: 51877020-51882170 Medicago truncatula
Medtr4g125060 0.5kb downstream 0.5kb downstream 500 false chr4: 51877020-51877519 Medicago truncatula
Medtr4g125060 1.0kb upstream 1.0kb upstream 5651 true chr4: 51877520-51883170 Medicago truncatula
Medtr4g125060 1.0kb upstream 1.0kb upstream 1000 false chr4: 51882171-51883170 Medicago truncatula
Medtr4g125060 1.0kb downstream 1.0kb downstream 5651 true chr4: 51876520-51882170 Medicago truncatula
Medtr4g125060 1.0kb downstream 1.0kb downstream 1000 false chr4: 51876520-51877519 Medicago truncatula
Medtr4g125060 2.0kb upstream 2.0kb upstream 6651 true chr4: 51877520-51884170 Medicago truncatula
Medtr4g125060 2.0kb upstream 2.0kb upstream 2000 false chr4: 51882171-51884170 Medicago truncatula
Medtr4g125060 2.0kb downstream 2.0kb downstream 6651 true chr4: 51875520-51882170 Medicago truncatula
Medtr4g125060 2.0kb downstream 2.0kb downstream 2000 false chr4: 51875520-51877519 Medicago truncatula
Medtr4g125060 5.0kb upstream 5.0kb upstream 9651 true chr4: 51877520-51887170 Medicago truncatula
Medtr4g125060 5.0kb upstream 5.0kb upstream 5000 false chr4: 51882171-51887170 Medicago truncatula
Medtr4g125060 5.0kb downstream 5.0kb downstream 9651 true chr4: 51872520-51882170 Medicago truncatula
Medtr4g125060 5.0kb downstream 5.0kb downstream 5000 false chr4: 51872520-51877519 Medicago truncatula
Medtr4g125060 10.0kb upstream 10.0kb upstream 14651 true chr4: 51877520-51892170 Medicago truncatula
Medtr4g125060 10.0kb upstream 10.0kb upstream 10000 false chr4: 51882171-51892170 Medicago truncatula
Medtr4g125060 10.0kb downstream 10.0kb downstream 14651 true chr4: 51867520-51882170 Medicago truncatula
Medtr4g125060 10.0kb downstream 10.0kb downstream 10000 false chr4: 51867520-51877519 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314194 5265 Fabidae View MSA
124073256 5270 Rosid View MSA
123736665 5271 Pentapetalae View MSA
122795116 5272 Eudicot View MSA
122045954 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121351071 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.149        
cufflinks 1.047        
cufflinks 1.057        
cufflinks 1.203        
cufflinks 1.152        
cufflinks 0.463       Low
cufflinks 1.664        
cufflinks 0.819        
cufflinks 2.162       High

0 Strain