Gene : Medtr4g125100 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF06172 - Cupin superfamily (DUF985) (Cupin_5) Description:  cupin family protein
Genomic Order:  6642 Name:  ? Medtr4g125100
Secondary Identifier:  ? PAC:31110141
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g125100 0.5kb upstream 0.5kb upstream 2570 true chr4: 51853338-51855907 Medicago truncatula
Medtr4g125100 0.5kb upstream 0.5kb upstream 500 false chr4: 51853338-51853837 Medicago truncatula
Medtr4g125100 0.5kb downstream 0.5kb downstream 2570 true chr4: 51853838-51856407 Medicago truncatula
Medtr4g125100 0.5kb downstream 0.5kb downstream 500 false chr4: 51855908-51856407 Medicago truncatula
Medtr4g125100 1.0kb upstream 1.0kb upstream 3070 true chr4: 51852838-51855907 Medicago truncatula
Medtr4g125100 1.0kb upstream 1.0kb upstream 1000 false chr4: 51852838-51853837 Medicago truncatula
Medtr4g125100 1.0kb downstream 1.0kb downstream 3070 true chr4: 51853838-51856907 Medicago truncatula
Medtr4g125100 1.0kb downstream 1.0kb downstream 1000 false chr4: 51855908-51856907 Medicago truncatula
Medtr4g125100 2.0kb upstream 2.0kb upstream 4070 true chr4: 51851838-51855907 Medicago truncatula
Medtr4g125100 2.0kb upstream 2.0kb upstream 2000 false chr4: 51851838-51853837 Medicago truncatula
Medtr4g125100 2.0kb downstream 2.0kb downstream 4070 true chr4: 51853838-51857907 Medicago truncatula
Medtr4g125100 2.0kb downstream 2.0kb downstream 2000 false chr4: 51855908-51857907 Medicago truncatula
Medtr4g125100 5.0kb upstream 5.0kb upstream 7070 true chr4: 51848838-51855907 Medicago truncatula
Medtr4g125100 5.0kb upstream 5.0kb upstream 5000 false chr4: 51848838-51853837 Medicago truncatula
Medtr4g125100 5.0kb downstream 5.0kb downstream 7070 true chr4: 51853838-51860907 Medicago truncatula
Medtr4g125100 5.0kb downstream 5.0kb downstream 5000 false chr4: 51855908-51860907 Medicago truncatula
Medtr4g125100 10.0kb upstream 10.0kb upstream 12070 true chr4: 51843838-51855907 Medicago truncatula
Medtr4g125100 10.0kb upstream 10.0kb upstream 10000 false chr4: 51843838-51853837 Medicago truncatula
Medtr4g125100 10.0kb downstream 10.0kb downstream 12070 true chr4: 51853838-51865907 Medicago truncatula
Medtr4g125100 10.0kb downstream 10.0kb downstream 10000 false chr4: 51855908-51865907 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299495 5265 Fabidae View MSA
124063762 5270 Rosid View MSA
123736862 5271 Pentapetalae View MSA
122786910 5272 Eudicot View MSA
122051010 5273 Angiosperm View MSA
121346638 5274 Embryophyte View MSA
123426052 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.584     High  
cufflinks 13.625     High  
cufflinks 9.254       Low
cufflinks 48.491     High High
cufflinks 15.559     High  
cufflinks 31.353     High  
cufflinks 18.619     High  
cufflinks 10.108     High Low
cufflinks 41.602     High High

0 Strain