Gene : Medtr4g124960 M. truncatula Mt4.0v1
Defline:  (1 of 14) PF06200//PF09425 - tify domain (tify) // Divergent CCT motif (CCT_2) Description:  jasmonate zim-domain protein
Genomic Order:  6638 Name:  ? Medtr4g124960
Secondary Identifier:  ? PAC:31110251
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g124960 0.5kb upstream 0.5kb upstream 2689 true chr4: 51826800-51829488 Medicago truncatula
Medtr4g124960 0.5kb upstream 0.5kb upstream 500 false chr4: 51828989-51829488 Medicago truncatula
Medtr4g124960 0.5kb downstream 0.5kb downstream 2689 true chr4: 51826300-51828988 Medicago truncatula
Medtr4g124960 0.5kb downstream 0.5kb downstream 500 false chr4: 51826300-51826799 Medicago truncatula
Medtr4g124960 1.0kb upstream 1.0kb upstream 3189 true chr4: 51826800-51829988 Medicago truncatula
Medtr4g124960 1.0kb upstream 1.0kb upstream 1000 false chr4: 51828989-51829988 Medicago truncatula
Medtr4g124960 1.0kb downstream 1.0kb downstream 3189 true chr4: 51825800-51828988 Medicago truncatula
Medtr4g124960 1.0kb downstream 1.0kb downstream 1000 false chr4: 51825800-51826799 Medicago truncatula
Medtr4g124960 2.0kb upstream 2.0kb upstream 4189 true chr4: 51826800-51830988 Medicago truncatula
Medtr4g124960 2.0kb upstream 2.0kb upstream 2000 false chr4: 51828989-51830988 Medicago truncatula
Medtr4g124960 2.0kb downstream 2.0kb downstream 4189 true chr4: 51824800-51828988 Medicago truncatula
Medtr4g124960 2.0kb downstream 2.0kb downstream 2000 false chr4: 51824800-51826799 Medicago truncatula
Medtr4g124960 5.0kb upstream 5.0kb upstream 7189 true chr4: 51826800-51833988 Medicago truncatula
Medtr4g124960 5.0kb upstream 5.0kb upstream 5000 false chr4: 51828989-51833988 Medicago truncatula
Medtr4g124960 5.0kb downstream 5.0kb downstream 7189 true chr4: 51821800-51828988 Medicago truncatula
Medtr4g124960 5.0kb downstream 5.0kb downstream 5000 false chr4: 51821800-51826799 Medicago truncatula
Medtr4g124960 10.0kb upstream 10.0kb upstream 12189 true chr4: 51826800-51838988 Medicago truncatula
Medtr4g124960 10.0kb upstream 10.0kb upstream 10000 false chr4: 51828989-51838988 Medicago truncatula
Medtr4g124960 10.0kb downstream 10.0kb downstream 12189 true chr4: 51816800-51828988 Medicago truncatula
Medtr4g124960 10.0kb downstream 10.0kb downstream 10000 false chr4: 51816800-51826799 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315145 5265 Fabidae View MSA
124071926 5270 Rosid View MSA
123747835 5271 Pentapetalae View MSA
122797679 5272 Eudicot View MSA
122046349 5273 Angiosperm View MSA
121349662 5274 Embryophyte View MSA
123381390 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.468     High High
cufflinks 2.957        
cufflinks 11.87     High  
cufflinks 1.871       Low
cufflinks 3.248        
cufflinks 4.708        
cufflinks 10.166     High  
cufflinks 3.47        
cufflinks 18.295     High High

0 Strain