Gene : Medtr4g124980 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31339:SF0 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Description:  pectin lyase superfamily protein
Genomic Order:  6639 Name:  ? Medtr4g124980
Secondary Identifier:  ? PAC:31107817
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g124980 0.5kb upstream 0.5kb upstream 4582 true chr4: 51838098-51842679 Medicago truncatula
Medtr4g124980 0.5kb upstream 0.5kb upstream 500 false chr4: 51842180-51842679 Medicago truncatula
Medtr4g124980 0.5kb downstream 0.5kb downstream 4582 true chr4: 51837598-51842179 Medicago truncatula
Medtr4g124980 0.5kb downstream 0.5kb downstream 500 false chr4: 51837598-51838097 Medicago truncatula
Medtr4g124980 1.0kb upstream 1.0kb upstream 5082 true chr4: 51838098-51843179 Medicago truncatula
Medtr4g124980 1.0kb upstream 1.0kb upstream 1000 false chr4: 51842180-51843179 Medicago truncatula
Medtr4g124980 1.0kb downstream 1.0kb downstream 5082 true chr4: 51837098-51842179 Medicago truncatula
Medtr4g124980 1.0kb downstream 1.0kb downstream 1000 false chr4: 51837098-51838097 Medicago truncatula
Medtr4g124980 2.0kb upstream 2.0kb upstream 6082 true chr4: 51838098-51844179 Medicago truncatula
Medtr4g124980 2.0kb upstream 2.0kb upstream 2000 false chr4: 51842180-51844179 Medicago truncatula
Medtr4g124980 2.0kb downstream 2.0kb downstream 6082 true chr4: 51836098-51842179 Medicago truncatula
Medtr4g124980 2.0kb downstream 2.0kb downstream 2000 false chr4: 51836098-51838097 Medicago truncatula
Medtr4g124980 5.0kb upstream 5.0kb upstream 9082 true chr4: 51838098-51847179 Medicago truncatula
Medtr4g124980 5.0kb upstream 5.0kb upstream 5000 false chr4: 51842180-51847179 Medicago truncatula
Medtr4g124980 5.0kb downstream 5.0kb downstream 9082 true chr4: 51833098-51842179 Medicago truncatula
Medtr4g124980 5.0kb downstream 5.0kb downstream 5000 false chr4: 51833098-51838097 Medicago truncatula
Medtr4g124980 10.0kb upstream 10.0kb upstream 14082 true chr4: 51838098-51852179 Medicago truncatula
Medtr4g124980 10.0kb upstream 10.0kb upstream 10000 false chr4: 51842180-51852179 Medicago truncatula
Medtr4g124980 10.0kb downstream 10.0kb downstream 14082 true chr4: 51828098-51842179 Medicago truncatula
Medtr4g124980 10.0kb downstream 10.0kb downstream 10000 false chr4: 51828098-51838097 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026431 5273 Angiosperm View MSA
122302558 5265 Fabidae View MSA
124066643 5270 Rosid View MSA
123751274 5271 Pentapetalae View MSA
122794411 5272 Eudicot View MSA
121348629 5274 Embryophyte View MSA
123380947 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.549        
cufflinks 3.456        
cufflinks 3.333        
cufflinks 7.132       High
cufflinks 4.403        
cufflinks 2.117       Low
cufflinks 4.397        
cufflinks 3.052        
cufflinks 6.806       High

0 Strain