Gene : Medtr4g124880 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.3.1.179 - Beta-ketoacyl-[acyl-carrier-protein] synthase II / KASII Description:  3-oxoacyl-(acyl carrier) synthase II
Genomic Order:  6631 Name:  ? Medtr4g124880
Secondary Identifier:  ? PAC:31106526
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula FASYN-ELONG-PWY Medicago truncatula pathologic  
Mtruncatula PWY-5156 Medicago truncatula pathologic  
Mtruncatula PWY-5971 Medicago truncatula pathologic  
Mtruncatula PWY-5973 Medicago truncatula pathologic  
Mtruncatula PWY-5989 Medicago truncatula pathologic  
Mtruncatula PWY-6282 Medicago truncatula pathologic  
Mtruncatula PWY-7388 Medicago truncatula pathologic  
Mtruncatula PWY-7663 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g124880 0.5kb upstream 0.5kb upstream 7520 true chr4: 51770182-51777701 Medicago truncatula
Medtr4g124880 0.5kb upstream 0.5kb upstream 500 false chr4: 51777202-51777701 Medicago truncatula
Medtr4g124880 0.5kb downstream 0.5kb downstream 7520 true chr4: 51769682-51777201 Medicago truncatula
Medtr4g124880 0.5kb downstream 0.5kb downstream 500 false chr4: 51769682-51770181 Medicago truncatula
Medtr4g124880 1.0kb upstream 1.0kb upstream 8020 true chr4: 51770182-51778201 Medicago truncatula
Medtr4g124880 1.0kb upstream 1.0kb upstream 1000 false chr4: 51777202-51778201 Medicago truncatula
Medtr4g124880 1.0kb downstream 1.0kb downstream 8020 true chr4: 51769182-51777201 Medicago truncatula
Medtr4g124880 1.0kb downstream 1.0kb downstream 1000 false chr4: 51769182-51770181 Medicago truncatula
Medtr4g124880 2.0kb upstream 2.0kb upstream 9020 true chr4: 51770182-51779201 Medicago truncatula
Medtr4g124880 2.0kb upstream 2.0kb upstream 2000 false chr4: 51777202-51779201 Medicago truncatula
Medtr4g124880 2.0kb downstream 2.0kb downstream 9020 true chr4: 51768182-51777201 Medicago truncatula
Medtr4g124880 2.0kb downstream 2.0kb downstream 2000 false chr4: 51768182-51770181 Medicago truncatula
Medtr4g124880 5.0kb upstream 5.0kb upstream 12020 true chr4: 51770182-51782201 Medicago truncatula
Medtr4g124880 5.0kb upstream 5.0kb upstream 5000 false chr4: 51777202-51782201 Medicago truncatula
Medtr4g124880 5.0kb downstream 5.0kb downstream 12020 true chr4: 51765182-51777201 Medicago truncatula
Medtr4g124880 5.0kb downstream 5.0kb downstream 5000 false chr4: 51765182-51770181 Medicago truncatula
Medtr4g124880 10.0kb upstream 10.0kb upstream 17020 true chr4: 51770182-51787201 Medicago truncatula
Medtr4g124880 10.0kb upstream 10.0kb upstream 10000 false chr4: 51777202-51787201 Medicago truncatula
Medtr4g124880 10.0kb downstream 10.0kb downstream 17020 true chr4: 51760182-51777201 Medicago truncatula
Medtr4g124880 10.0kb downstream 10.0kb downstream 10000 false chr4: 51760182-51770181 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311031 5265 Fabidae View MSA
124071420 5270 Rosid View MSA
123738483 5271 Pentapetalae View MSA
122792751 5272 Eudicot View MSA
122051170 5273 Angiosperm View MSA
121345587 5274 Embryophyte View MSA
123424058 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.605       Low
cufflinks 3.568        
cufflinks 2.711        
cufflinks 0.784       Low
cufflinks 2.932        
cufflinks 0.549       Low
cufflinks 2.55        
cufflinks 2.788        
cufflinks 2.336        

0 Strain