Gene : Medtr4g125770 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10052//PTHR10052:SF11 - 60S RIBOSOMAL PROTEIN L18A Description:  ribosomal protein L18ae family protein
Genomic Order:  6691 Name:  ? Medtr4g125770
Secondary Identifier:  ? PAC:31108582
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g125770 0.5kb upstream 0.5kb upstream 5685 true chr4: 52198828-52204512 Medicago truncatula
Medtr4g125770 0.5kb upstream 0.5kb upstream 500 false chr4: 52204013-52204512 Medicago truncatula
Medtr4g125770 0.5kb downstream 0.5kb downstream 5685 true chr4: 52198328-52204012 Medicago truncatula
Medtr4g125770 0.5kb downstream 0.5kb downstream 500 false chr4: 52198328-52198827 Medicago truncatula
Medtr4g125770 1.0kb upstream 1.0kb upstream 6185 true chr4: 52198828-52205012 Medicago truncatula
Medtr4g125770 1.0kb upstream 1.0kb upstream 1000 false chr4: 52204013-52205012 Medicago truncatula
Medtr4g125770 1.0kb downstream 1.0kb downstream 6185 true chr4: 52197828-52204012 Medicago truncatula
Medtr4g125770 1.0kb downstream 1.0kb downstream 1000 false chr4: 52197828-52198827 Medicago truncatula
Medtr4g125770 2.0kb upstream 2.0kb upstream 7185 true chr4: 52198828-52206012 Medicago truncatula
Medtr4g125770 2.0kb upstream 2.0kb upstream 2000 false chr4: 52204013-52206012 Medicago truncatula
Medtr4g125770 2.0kb downstream 2.0kb downstream 7185 true chr4: 52196828-52204012 Medicago truncatula
Medtr4g125770 2.0kb downstream 2.0kb downstream 2000 false chr4: 52196828-52198827 Medicago truncatula
Medtr4g125770 5.0kb upstream 5.0kb upstream 10185 true chr4: 52198828-52209012 Medicago truncatula
Medtr4g125770 5.0kb upstream 5.0kb upstream 5000 false chr4: 52204013-52209012 Medicago truncatula
Medtr4g125770 5.0kb downstream 5.0kb downstream 10185 true chr4: 52193828-52204012 Medicago truncatula
Medtr4g125770 5.0kb downstream 5.0kb downstream 5000 false chr4: 52193828-52198827 Medicago truncatula
Medtr4g125770 10.0kb upstream 10.0kb upstream 15185 true chr4: 52198828-52214012 Medicago truncatula
Medtr4g125770 10.0kb upstream 10.0kb upstream 10000 false chr4: 52204013-52214012 Medicago truncatula
Medtr4g125770 10.0kb downstream 10.0kb downstream 15185 true chr4: 52188828-52204012 Medicago truncatula
Medtr4g125770 10.0kb downstream 10.0kb downstream 10000 false chr4: 52188828-52198827 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027441 5273 Angiosperm View MSA
122311030 5265 Fabidae View MSA
124066289 5270 Rosid View MSA
123745455 5271 Pentapetalae View MSA
122796236 5272 Eudicot View MSA
121350597 5274 Embryophyte View MSA
123425775 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.278       High
cufflinks 0.478        
cufflinks 0.608        
cufflinks 0.593        
cufflinks 0.547        
cufflinks 0.518        
cufflinks 1.047       High
cufflinks 0.386       Low
cufflinks 0.715        

0 Strain