Gene : Medtr4g126040 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22942:SF1 - MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG Description:  DNA repair protein RecA, putative
Genomic Order:  6711 Name:  ? Medtr4g126040
Secondary Identifier:  ? PAC:31109051
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g126040 0.5kb upstream 0.5kb upstream 6333 true chr4: 52379845-52386177 Medicago truncatula
Medtr4g126040 0.5kb upstream 0.5kb upstream 500 false chr4: 52379845-52380344 Medicago truncatula
Medtr4g126040 0.5kb downstream 0.5kb downstream 6333 true chr4: 52380345-52386677 Medicago truncatula
Medtr4g126040 0.5kb downstream 0.5kb downstream 500 false chr4: 52386178-52386677 Medicago truncatula
Medtr4g126040 1.0kb upstream 1.0kb upstream 6833 true chr4: 52379345-52386177 Medicago truncatula
Medtr4g126040 1.0kb upstream 1.0kb upstream 1000 false chr4: 52379345-52380344 Medicago truncatula
Medtr4g126040 1.0kb downstream 1.0kb downstream 6833 true chr4: 52380345-52387177 Medicago truncatula
Medtr4g126040 1.0kb downstream 1.0kb downstream 1000 false chr4: 52386178-52387177 Medicago truncatula
Medtr4g126040 2.0kb upstream 2.0kb upstream 7833 true chr4: 52378345-52386177 Medicago truncatula
Medtr4g126040 2.0kb upstream 2.0kb upstream 2000 false chr4: 52378345-52380344 Medicago truncatula
Medtr4g126040 2.0kb downstream 2.0kb downstream 7833 true chr4: 52380345-52388177 Medicago truncatula
Medtr4g126040 2.0kb downstream 2.0kb downstream 2000 false chr4: 52386178-52388177 Medicago truncatula
Medtr4g126040 5.0kb upstream 5.0kb upstream 10833 true chr4: 52375345-52386177 Medicago truncatula
Medtr4g126040 5.0kb upstream 5.0kb upstream 5000 false chr4: 52375345-52380344 Medicago truncatula
Medtr4g126040 5.0kb downstream 5.0kb downstream 10833 true chr4: 52380345-52391177 Medicago truncatula
Medtr4g126040 5.0kb downstream 5.0kb downstream 5000 false chr4: 52386178-52391177 Medicago truncatula
Medtr4g126040 10.0kb upstream 10.0kb upstream 15833 true chr4: 52370345-52386177 Medicago truncatula
Medtr4g126040 10.0kb upstream 10.0kb upstream 10000 false chr4: 52370345-52380344 Medicago truncatula
Medtr4g126040 10.0kb downstream 10.0kb downstream 15833 true chr4: 52380345-52396177 Medicago truncatula
Medtr4g126040 10.0kb downstream 10.0kb downstream 10000 false chr4: 52386178-52396177 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299500 5265 Fabidae View MSA
124060910 5270 Rosid View MSA
123743404 5271 Pentapetalae View MSA
122790818 5272 Eudicot View MSA
122045748 5273 Angiosperm View MSA
121351318 5274 Embryophyte View MSA
123382118 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.559        
cufflinks 0.585        
cufflinks 0.846       High
cufflinks 0.233       Low
cufflinks 0.63        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.424        
cufflinks 0.387        
cufflinks 0.391        

0 Strain