Gene : Medtr4g126780 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13096 - MINA53 MYC INDUCED NUCLEAR ANTIGEN Description:  cupin superfamily protein
Genomic Order:  6748 Name:  ? Medtr4g126780
Secondary Identifier:  ? PAC:31111665
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g126780 0.5kb upstream 0.5kb upstream 6941 true chr4: 52640110-52647050 Medicago truncatula
Medtr4g126780 0.5kb upstream 0.5kb upstream 500 false chr4: 52646551-52647050 Medicago truncatula
Medtr4g126780 0.5kb downstream 0.5kb downstream 6941 true chr4: 52639610-52646550 Medicago truncatula
Medtr4g126780 0.5kb downstream 0.5kb downstream 500 false chr4: 52639610-52640109 Medicago truncatula
Medtr4g126780 1.0kb upstream 1.0kb upstream 7441 true chr4: 52640110-52647550 Medicago truncatula
Medtr4g126780 1.0kb upstream 1.0kb upstream 1000 false chr4: 52646551-52647550 Medicago truncatula
Medtr4g126780 1.0kb downstream 1.0kb downstream 7441 true chr4: 52639110-52646550 Medicago truncatula
Medtr4g126780 1.0kb downstream 1.0kb downstream 1000 false chr4: 52639110-52640109 Medicago truncatula
Medtr4g126780 2.0kb upstream 2.0kb upstream 8441 true chr4: 52640110-52648550 Medicago truncatula
Medtr4g126780 2.0kb upstream 2.0kb upstream 2000 false chr4: 52646551-52648550 Medicago truncatula
Medtr4g126780 2.0kb downstream 2.0kb downstream 8441 true chr4: 52638110-52646550 Medicago truncatula
Medtr4g126780 2.0kb downstream 2.0kb downstream 2000 false chr4: 52638110-52640109 Medicago truncatula
Medtr4g126780 5.0kb upstream 5.0kb upstream 11441 true chr4: 52640110-52651550 Medicago truncatula
Medtr4g126780 5.0kb upstream 5.0kb upstream 5000 false chr4: 52646551-52651550 Medicago truncatula
Medtr4g126780 5.0kb downstream 5.0kb downstream 11441 true chr4: 52635110-52646550 Medicago truncatula
Medtr4g126780 5.0kb downstream 5.0kb downstream 5000 false chr4: 52635110-52640109 Medicago truncatula
Medtr4g126780 10.0kb upstream 10.0kb upstream 16441 true chr4: 52640110-52656550 Medicago truncatula
Medtr4g126780 10.0kb upstream 10.0kb upstream 10000 false chr4: 52646551-52656550 Medicago truncatula
Medtr4g126780 10.0kb downstream 10.0kb downstream 16441 true chr4: 52630110-52646550 Medicago truncatula
Medtr4g126780 10.0kb downstream 10.0kb downstream 10000 false chr4: 52630110-52640109 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299004 5265 Fabidae View MSA
124070828 5270 Rosid View MSA
123745508 5271 Pentapetalae View MSA
122794724 5272 Eudicot View MSA
122049109 5273 Angiosperm View MSA
121348798 5274 Embryophyte View MSA
123428618 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.745        
cufflinks 1.089        
cufflinks 1.403       High
cufflinks 0.453        
cufflinks 1.26        
cufflinks 0.281       Low
cufflinks 0.832        
cufflinks 1.215        
cufflinks 0.406       Low

0 Strain