Gene : Medtr4g132250 M. truncatula Mt4.0v1
Defline:  (1 of 3) 4.2.1.51//4.2.1.91 - Arogenate dehydratase / Carboxycyclohexadienyl dehydratase Description:  arogenate/prephenate dehydratase
Genomic Order:  7114 Name:  ? Medtr4g132250
Secondary Identifier:  ? PAC:31111589
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-3462 Medicago truncatula pathologic  
Mtruncatula PWY-3481 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g132250 0.5kb upstream 0.5kb upstream 6661 true chr4: 55253178-55259838 Medicago truncatula
Medtr4g132250 0.5kb upstream 0.5kb upstream 500 false chr4: 55259339-55259838 Medicago truncatula
Medtr4g132250 0.5kb downstream 0.5kb downstream 6661 true chr4: 55252678-55259338 Medicago truncatula
Medtr4g132250 0.5kb downstream 0.5kb downstream 500 false chr4: 55252678-55253177 Medicago truncatula
Medtr4g132250 1.0kb upstream 1.0kb upstream 7161 true chr4: 55253178-55260338 Medicago truncatula
Medtr4g132250 1.0kb upstream 1.0kb upstream 1000 false chr4: 55259339-55260338 Medicago truncatula
Medtr4g132250 1.0kb downstream 1.0kb downstream 7161 true chr4: 55252178-55259338 Medicago truncatula
Medtr4g132250 1.0kb downstream 1.0kb downstream 1000 false chr4: 55252178-55253177 Medicago truncatula
Medtr4g132250 2.0kb upstream 2.0kb upstream 8161 true chr4: 55253178-55261338 Medicago truncatula
Medtr4g132250 2.0kb upstream 2.0kb upstream 2000 false chr4: 55259339-55261338 Medicago truncatula
Medtr4g132250 2.0kb downstream 2.0kb downstream 8161 true chr4: 55251178-55259338 Medicago truncatula
Medtr4g132250 2.0kb downstream 2.0kb downstream 2000 false chr4: 55251178-55253177 Medicago truncatula
Medtr4g132250 5.0kb upstream 5.0kb upstream 11161 true chr4: 55253178-55264338 Medicago truncatula
Medtr4g132250 5.0kb upstream 5.0kb upstream 5000 false chr4: 55259339-55264338 Medicago truncatula
Medtr4g132250 5.0kb downstream 5.0kb downstream 11161 true chr4: 55248178-55259338 Medicago truncatula
Medtr4g132250 5.0kb downstream 5.0kb downstream 5000 false chr4: 55248178-55253177 Medicago truncatula
Medtr4g132250 10.0kb upstream 10.0kb upstream 16161 true chr4: 55253178-55269338 Medicago truncatula
Medtr4g132250 10.0kb upstream 10.0kb upstream 10000 false chr4: 55259339-55269338 Medicago truncatula
Medtr4g132250 10.0kb downstream 10.0kb downstream 16161 true chr4: 55243178-55259338 Medicago truncatula
Medtr4g132250 10.0kb downstream 10.0kb downstream 10000 false chr4: 55243178-55253177 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305741 5265 Fabidae View MSA
124070926 5270 Rosid View MSA
123746635 5271 Pentapetalae View MSA
122795634 5272 Eudicot View MSA
122042719 5273 Angiosperm View MSA
121351398 5274 Embryophyte View MSA
123427097 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.309        
cufflinks 2.003       High
cufflinks 0.645        
cufflinks 0.614        
cufflinks 1.888       High
cufflinks 0.272       Low
cufflinks 0.645        
cufflinks 0.847        
cufflinks 0.963        

0 Strain