Gene : Medtr4g132360 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.1.2.10 - Aminomethyltransferase / Tetrahydrofolate aminomethyltransferase Description:  glycine cleavage system T protein
Genomic Order:  7124 Name:  ? Medtr4g132360
Secondary Identifier:  ? PAC:31106972
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula GLYCLEAV-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g132360 0.5kb upstream 0.5kb upstream 4336 true chr4: 55312165-55316500 Medicago truncatula
Medtr4g132360 0.5kb upstream 0.5kb upstream 500 false chr4: 55312165-55312664 Medicago truncatula
Medtr4g132360 0.5kb downstream 0.5kb downstream 4336 true chr4: 55312665-55317000 Medicago truncatula
Medtr4g132360 0.5kb downstream 0.5kb downstream 500 false chr4: 55316501-55317000 Medicago truncatula
Medtr4g132360 1.0kb upstream 1.0kb upstream 4836 true chr4: 55311665-55316500 Medicago truncatula
Medtr4g132360 1.0kb upstream 1.0kb upstream 1000 false chr4: 55311665-55312664 Medicago truncatula
Medtr4g132360 1.0kb downstream 1.0kb downstream 4836 true chr4: 55312665-55317500 Medicago truncatula
Medtr4g132360 1.0kb downstream 1.0kb downstream 1000 false chr4: 55316501-55317500 Medicago truncatula
Medtr4g132360 2.0kb upstream 2.0kb upstream 5836 true chr4: 55310665-55316500 Medicago truncatula
Medtr4g132360 2.0kb upstream 2.0kb upstream 2000 false chr4: 55310665-55312664 Medicago truncatula
Medtr4g132360 2.0kb downstream 2.0kb downstream 5836 true chr4: 55312665-55318500 Medicago truncatula
Medtr4g132360 2.0kb downstream 2.0kb downstream 2000 false chr4: 55316501-55318500 Medicago truncatula
Medtr4g132360 5.0kb upstream 5.0kb upstream 8836 true chr4: 55307665-55316500 Medicago truncatula
Medtr4g132360 5.0kb upstream 5.0kb upstream 5000 false chr4: 55307665-55312664 Medicago truncatula
Medtr4g132360 5.0kb downstream 5.0kb downstream 8836 true chr4: 55312665-55321500 Medicago truncatula
Medtr4g132360 5.0kb downstream 5.0kb downstream 5000 false chr4: 55316501-55321500 Medicago truncatula
Medtr4g132360 10.0kb upstream 10.0kb upstream 13836 true chr4: 55302665-55316500 Medicago truncatula
Medtr4g132360 10.0kb upstream 10.0kb upstream 10000 false chr4: 55302665-55312664 Medicago truncatula
Medtr4g132360 10.0kb downstream 10.0kb downstream 13836 true chr4: 55312665-55326500 Medicago truncatula
Medtr4g132360 10.0kb downstream 10.0kb downstream 10000 false chr4: 55316501-55326500 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304206 5265 Fabidae View MSA
124063348 5270 Rosid View MSA
123743205 5271 Pentapetalae View MSA
122791059 5272 Eudicot View MSA
122045036 5273 Angiosperm View MSA
121345728 5274 Embryophyte View MSA
123424844 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.58        
cufflinks 147.831     High High
cufflinks 81.205     High  
cufflinks 3.32        
cufflinks 92.977     High  
cufflinks 0.682       Low
cufflinks 4.088        
cufflinks 121.455     High High
cufflinks 8.708        

0 Strain