Gene : Medtr4g132070 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR24349:SF89 - CALCIUM-DEPENDENT PROTEIN KINASE 29 Description:  calmodulin-domain kinase CDPK protein
Genomic Order:  7099 Name:  ? Medtr4g132070
Secondary Identifier:  ? PAC:31108323
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g132070 0.5kb upstream 0.5kb upstream 5433 true chr4: 55166975-55172407 Medicago truncatula
Medtr4g132070 0.5kb upstream 0.5kb upstream 500 false chr4: 55166975-55167474 Medicago truncatula
Medtr4g132070 0.5kb downstream 0.5kb downstream 5433 true chr4: 55167475-55172907 Medicago truncatula
Medtr4g132070 0.5kb downstream 0.5kb downstream 500 false chr4: 55172408-55172907 Medicago truncatula
Medtr4g132070 1.0kb upstream 1.0kb upstream 5933 true chr4: 55166475-55172407 Medicago truncatula
Medtr4g132070 1.0kb upstream 1.0kb upstream 1000 false chr4: 55166475-55167474 Medicago truncatula
Medtr4g132070 1.0kb downstream 1.0kb downstream 5933 true chr4: 55167475-55173407 Medicago truncatula
Medtr4g132070 1.0kb downstream 1.0kb downstream 1000 false chr4: 55172408-55173407 Medicago truncatula
Medtr4g132070 2.0kb upstream 2.0kb upstream 6933 true chr4: 55165475-55172407 Medicago truncatula
Medtr4g132070 2.0kb upstream 2.0kb upstream 2000 false chr4: 55165475-55167474 Medicago truncatula
Medtr4g132070 2.0kb downstream 2.0kb downstream 6933 true chr4: 55167475-55174407 Medicago truncatula
Medtr4g132070 2.0kb downstream 2.0kb downstream 2000 false chr4: 55172408-55174407 Medicago truncatula
Medtr4g132070 5.0kb upstream 5.0kb upstream 9933 true chr4: 55162475-55172407 Medicago truncatula
Medtr4g132070 5.0kb upstream 5.0kb upstream 5000 false chr4: 55162475-55167474 Medicago truncatula
Medtr4g132070 5.0kb downstream 5.0kb downstream 9933 true chr4: 55167475-55177407 Medicago truncatula
Medtr4g132070 5.0kb downstream 5.0kb downstream 5000 false chr4: 55172408-55177407 Medicago truncatula
Medtr4g132070 10.0kb upstream 10.0kb upstream 14933 true chr4: 55157475-55172407 Medicago truncatula
Medtr4g132070 10.0kb upstream 10.0kb upstream 10000 false chr4: 55157475-55167474 Medicago truncatula
Medtr4g132070 10.0kb downstream 10.0kb downstream 14933 true chr4: 55167475-55182407 Medicago truncatula
Medtr4g132070 10.0kb downstream 10.0kb downstream 10000 false chr4: 55172408-55182407 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304470 5265 Fabidae View MSA
124069145 5270 Rosid View MSA
123751027 5271 Pentapetalae View MSA
122788788 5272 Eudicot View MSA
122048153 5273 Angiosperm View MSA
121310867 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.794        
cufflinks 8.52        
cufflinks 9.181        
cufflinks 6.095       Low
cufflinks 9.877        
cufflinks 6.371       Low
cufflinks 9.072        
cufflinks 8.112        
cufflinks 12.865     High High

0 Strain