Gene : Medtr4g132910 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG4262 - Uncharacterized conserved protein Description:  integrator complex subunit 3
Genomic Order:  7168 Name:  ? Medtr4g132910
Secondary Identifier:  ? PAC:31112451
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g132910 0.5kb upstream 0.5kb upstream 4719 true chr4: 55603999-55608717 Medicago truncatula
Medtr4g132910 0.5kb upstream 0.5kb upstream 500 false chr4: 55603999-55604498 Medicago truncatula
Medtr4g132910 0.5kb downstream 0.5kb downstream 4719 true chr4: 55604499-55609217 Medicago truncatula
Medtr4g132910 0.5kb downstream 0.5kb downstream 500 false chr4: 55608718-55609217 Medicago truncatula
Medtr4g132910 1.0kb upstream 1.0kb upstream 5219 true chr4: 55603499-55608717 Medicago truncatula
Medtr4g132910 1.0kb upstream 1.0kb upstream 1000 false chr4: 55603499-55604498 Medicago truncatula
Medtr4g132910 1.0kb downstream 1.0kb downstream 5219 true chr4: 55604499-55609717 Medicago truncatula
Medtr4g132910 1.0kb downstream 1.0kb downstream 1000 false chr4: 55608718-55609717 Medicago truncatula
Medtr4g132910 2.0kb upstream 2.0kb upstream 6219 true chr4: 55602499-55608717 Medicago truncatula
Medtr4g132910 2.0kb upstream 2.0kb upstream 2000 false chr4: 55602499-55604498 Medicago truncatula
Medtr4g132910 2.0kb downstream 2.0kb downstream 6219 true chr4: 55604499-55610717 Medicago truncatula
Medtr4g132910 2.0kb downstream 2.0kb downstream 2000 false chr4: 55608718-55610717 Medicago truncatula
Medtr4g132910 5.0kb upstream 5.0kb upstream 9219 true chr4: 55599499-55608717 Medicago truncatula
Medtr4g132910 5.0kb upstream 5.0kb upstream 5000 false chr4: 55599499-55604498 Medicago truncatula
Medtr4g132910 5.0kb downstream 5.0kb downstream 9219 true chr4: 55604499-55613717 Medicago truncatula
Medtr4g132910 5.0kb downstream 5.0kb downstream 5000 false chr4: 55608718-55613717 Medicago truncatula
Medtr4g132910 10.0kb upstream 10.0kb upstream 14219 true chr4: 55594499-55608717 Medicago truncatula
Medtr4g132910 10.0kb upstream 10.0kb upstream 10000 false chr4: 55594499-55604498 Medicago truncatula
Medtr4g132910 10.0kb downstream 10.0kb downstream 14219 true chr4: 55604499-55618717 Medicago truncatula
Medtr4g132910 10.0kb downstream 10.0kb downstream 10000 false chr4: 55608718-55618717 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026317 5273 Angiosperm View MSA
122301526 5265 Fabidae View MSA
124037150 5270 Rosid View MSA
123745641 5271 Pentapetalae View MSA
122771584 5272 Eudicot View MSA
121296275 5274 Embryophyte View MSA
123334469 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.477        
cufflinks 0.531        
cufflinks 0.752       High
cufflinks 0.164       Low
cufflinks 0.834       High
cufflinks 0.182       Low
cufflinks 0.323        
cufflinks 0.547        
cufflinks 0.315        

0 Strain