Gene : Medtr4g132810 M. truncatula Mt4.0v1
Defline:  (1 of 3) KOG1572 - Predicted protein tyrosine phosphatase Description:  tyrosine specific protein phosphatase family protein
Genomic Order:  7159 Name:  ? Medtr4g132810
Secondary Identifier:  ? PAC:31112031
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g132810 0.5kb upstream 0.5kb upstream 3645 true chr4: 55544901-55548545 Medicago truncatula
Medtr4g132810 0.5kb upstream 0.5kb upstream 500 false chr4: 55548046-55548545 Medicago truncatula
Medtr4g132810 0.5kb downstream 0.5kb downstream 3645 true chr4: 55544401-55548045 Medicago truncatula
Medtr4g132810 0.5kb downstream 0.5kb downstream 500 false chr4: 55544401-55544900 Medicago truncatula
Medtr4g132810 1.0kb upstream 1.0kb upstream 4145 true chr4: 55544901-55549045 Medicago truncatula
Medtr4g132810 1.0kb upstream 1.0kb upstream 1000 false chr4: 55548046-55549045 Medicago truncatula
Medtr4g132810 1.0kb downstream 1.0kb downstream 4145 true chr4: 55543901-55548045 Medicago truncatula
Medtr4g132810 1.0kb downstream 1.0kb downstream 1000 false chr4: 55543901-55544900 Medicago truncatula
Medtr4g132810 2.0kb upstream 2.0kb upstream 5145 true chr4: 55544901-55550045 Medicago truncatula
Medtr4g132810 2.0kb upstream 2.0kb upstream 2000 false chr4: 55548046-55550045 Medicago truncatula
Medtr4g132810 2.0kb downstream 2.0kb downstream 5145 true chr4: 55542901-55548045 Medicago truncatula
Medtr4g132810 2.0kb downstream 2.0kb downstream 2000 false chr4: 55542901-55544900 Medicago truncatula
Medtr4g132810 5.0kb upstream 5.0kb upstream 8145 true chr4: 55544901-55553045 Medicago truncatula
Medtr4g132810 5.0kb upstream 5.0kb upstream 5000 false chr4: 55548046-55553045 Medicago truncatula
Medtr4g132810 5.0kb downstream 5.0kb downstream 8145 true chr4: 55539901-55548045 Medicago truncatula
Medtr4g132810 5.0kb downstream 5.0kb downstream 5000 false chr4: 55539901-55544900 Medicago truncatula
Medtr4g132810 10.0kb upstream 10.0kb upstream 13145 true chr4: 55544901-55558045 Medicago truncatula
Medtr4g132810 10.0kb upstream 10.0kb upstream 10000 false chr4: 55548046-55558045 Medicago truncatula
Medtr4g132810 10.0kb downstream 10.0kb downstream 13145 true chr4: 55534901-55548045 Medicago truncatula
Medtr4g132810 10.0kb downstream 10.0kb downstream 10000 false chr4: 55534901-55544900 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296317 5265 Fabidae View MSA
124073099 5270 Rosid View MSA
123742973 5271 Pentapetalae View MSA
122795531 5272 Eudicot View MSA
122050938 5273 Angiosperm View MSA
121344841 5274 Embryophyte View MSA
123380112 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.22        
cufflinks 2.422       Low
cufflinks 3.623        
cufflinks 6.24        
cufflinks 2.27       Low
cufflinks 10.403       High
cufflinks 5.571        
cufflinks 3.115        
cufflinks 3.221        

0 Strain