Gene : Medtr4g123760 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10969:SF36 - AUTOPHAGY-RELATED PROTEIN 8H Description:  autophagy protein Atg8 ubiquitin-like protein
Genomic Order:  6532 Name:  ? Medtr4g123760
Secondary Identifier:  ? PAC:31109510
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g123760 0.5kb upstream 0.5kb upstream 3098 true chr4: 51007802-51010899 Medicago truncatula
Medtr4g123760 0.5kb upstream 0.5kb upstream 500 false chr4: 51010400-51010899 Medicago truncatula
Medtr4g123760 0.5kb downstream 0.5kb downstream 3098 true chr4: 51007302-51010399 Medicago truncatula
Medtr4g123760 0.5kb downstream 0.5kb downstream 500 false chr4: 51007302-51007801 Medicago truncatula
Medtr4g123760 1.0kb upstream 1.0kb upstream 3598 true chr4: 51007802-51011399 Medicago truncatula
Medtr4g123760 1.0kb upstream 1.0kb upstream 1000 false chr4: 51010400-51011399 Medicago truncatula
Medtr4g123760 1.0kb downstream 1.0kb downstream 3598 true chr4: 51006802-51010399 Medicago truncatula
Medtr4g123760 1.0kb downstream 1.0kb downstream 1000 false chr4: 51006802-51007801 Medicago truncatula
Medtr4g123760 2.0kb upstream 2.0kb upstream 4598 true chr4: 51007802-51012399 Medicago truncatula
Medtr4g123760 2.0kb upstream 2.0kb upstream 2000 false chr4: 51010400-51012399 Medicago truncatula
Medtr4g123760 2.0kb downstream 2.0kb downstream 4598 true chr4: 51005802-51010399 Medicago truncatula
Medtr4g123760 2.0kb downstream 2.0kb downstream 2000 false chr4: 51005802-51007801 Medicago truncatula
Medtr4g123760 5.0kb upstream 5.0kb upstream 7598 true chr4: 51007802-51015399 Medicago truncatula
Medtr4g123760 5.0kb upstream 5.0kb upstream 5000 false chr4: 51010400-51015399 Medicago truncatula
Medtr4g123760 5.0kb downstream 5.0kb downstream 7598 true chr4: 51002802-51010399 Medicago truncatula
Medtr4g123760 5.0kb downstream 5.0kb downstream 5000 false chr4: 51002802-51007801 Medicago truncatula
Medtr4g123760 10.0kb upstream 10.0kb upstream 12598 true chr4: 51007802-51020399 Medicago truncatula
Medtr4g123760 10.0kb upstream 10.0kb upstream 10000 false chr4: 51010400-51020399 Medicago truncatula
Medtr4g123760 10.0kb downstream 10.0kb downstream 12598 true chr4: 50997802-51010399 Medicago truncatula
Medtr4g123760 10.0kb downstream 10.0kb downstream 10000 false chr4: 50997802-51007801 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314398 5265 Fabidae View MSA
124068997 5270 Rosid View MSA
123743187 5271 Pentapetalae View MSA
122792251 5272 Eudicot View MSA
122048918 5273 Angiosperm View MSA
121349541 5274 Embryophyte View MSA
123427174 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.056        
cufflinks 2.192       Low
cufflinks 3.359        
cufflinks 4.299        
cufflinks 2.142       Low
cufflinks 9.417       High
cufflinks 12.518     High High
cufflinks 2.594        
cufflinks 7.953        

0 Strain