Gene : Medtr4g123563 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13683:SF296 - ASPARTYL PROTEASE FAMILY PROTEIN Description:  fungal proteinase A, aspartic proteinase superfamily protein
Genomic Order:  6582 Name:  ? Medtr4g123563
Secondary Identifier:  ? PAC:31112462
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g123563 0.5kb upstream 0.5kb upstream 3387 true chr4: 51382736-51386122 Medicago truncatula
Medtr4g123563 0.5kb upstream 0.5kb upstream 500 false chr4: 51382736-51383235 Medicago truncatula
Medtr4g123563 0.5kb downstream 0.5kb downstream 3387 true chr4: 51383236-51386622 Medicago truncatula
Medtr4g123563 0.5kb downstream 0.5kb downstream 500 false chr4: 51386123-51386622 Medicago truncatula
Medtr4g123563 1.0kb upstream 1.0kb upstream 3887 true chr4: 51382236-51386122 Medicago truncatula
Medtr4g123563 1.0kb upstream 1.0kb upstream 1000 false chr4: 51382236-51383235 Medicago truncatula
Medtr4g123563 1.0kb downstream 1.0kb downstream 3887 true chr4: 51383236-51387122 Medicago truncatula
Medtr4g123563 1.0kb downstream 1.0kb downstream 1000 false chr4: 51386123-51387122 Medicago truncatula
Medtr4g123563 2.0kb upstream 2.0kb upstream 4887 true chr4: 51381236-51386122 Medicago truncatula
Medtr4g123563 2.0kb upstream 2.0kb upstream 2000 false chr4: 51381236-51383235 Medicago truncatula
Medtr4g123563 2.0kb downstream 2.0kb downstream 4887 true chr4: 51383236-51388122 Medicago truncatula
Medtr4g123563 2.0kb downstream 2.0kb downstream 2000 false chr4: 51386123-51388122 Medicago truncatula
Medtr4g123563 5.0kb upstream 5.0kb upstream 7887 true chr4: 51378236-51386122 Medicago truncatula
Medtr4g123563 5.0kb upstream 5.0kb upstream 5000 false chr4: 51378236-51383235 Medicago truncatula
Medtr4g123563 5.0kb downstream 5.0kb downstream 7887 true chr4: 51383236-51391122 Medicago truncatula
Medtr4g123563 5.0kb downstream 5.0kb downstream 5000 false chr4: 51386123-51391122 Medicago truncatula
Medtr4g123563 10.0kb upstream 10.0kb upstream 12887 true chr4: 51373236-51386122 Medicago truncatula
Medtr4g123563 10.0kb upstream 10.0kb upstream 10000 false chr4: 51373236-51383235 Medicago truncatula
Medtr4g123563 10.0kb downstream 10.0kb downstream 12887 true chr4: 51383236-51396122 Medicago truncatula
Medtr4g123563 10.0kb downstream 10.0kb downstream 10000 false chr4: 51386123-51396122 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780043 5273 Angiosperm View MSA
122311661 5265 Fabidae View MSA
124071121 5270 Rosid View MSA
123744877 5271 Pentapetalae View MSA
122771281 5272 Eudicot View MSA
121051677 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.013     Low Low
cufflinks 6.37        
cufflinks 3.293        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 13.136     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 4.415        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain