Gene : Medtr4g123593 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12668:SF5 - UPF0136 MEMBRANE PROTEIN YJR085C Description:  transmembrane protein 14C
Genomic Order:  6587 Name:  ? Medtr4g123593
Secondary Identifier:  ? PAC:31107437
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g123593 0.5kb upstream 0.5kb upstream 3626 true chr4: 51408813-51412438 Medicago truncatula
Medtr4g123593 0.5kb upstream 0.5kb upstream 500 false chr4: 51408813-51409312 Medicago truncatula
Medtr4g123593 0.5kb downstream 0.5kb downstream 3626 true chr4: 51409313-51412938 Medicago truncatula
Medtr4g123593 0.5kb downstream 0.5kb downstream 500 false chr4: 51412439-51412938 Medicago truncatula
Medtr4g123593 1.0kb upstream 1.0kb upstream 4126 true chr4: 51408313-51412438 Medicago truncatula
Medtr4g123593 1.0kb upstream 1.0kb upstream 1000 false chr4: 51408313-51409312 Medicago truncatula
Medtr4g123593 1.0kb downstream 1.0kb downstream 4126 true chr4: 51409313-51413438 Medicago truncatula
Medtr4g123593 1.0kb downstream 1.0kb downstream 1000 false chr4: 51412439-51413438 Medicago truncatula
Medtr4g123593 2.0kb upstream 2.0kb upstream 5126 true chr4: 51407313-51412438 Medicago truncatula
Medtr4g123593 2.0kb upstream 2.0kb upstream 2000 false chr4: 51407313-51409312 Medicago truncatula
Medtr4g123593 2.0kb downstream 2.0kb downstream 5126 true chr4: 51409313-51414438 Medicago truncatula
Medtr4g123593 2.0kb downstream 2.0kb downstream 2000 false chr4: 51412439-51414438 Medicago truncatula
Medtr4g123593 5.0kb upstream 5.0kb upstream 8126 true chr4: 51404313-51412438 Medicago truncatula
Medtr4g123593 5.0kb upstream 5.0kb upstream 5000 false chr4: 51404313-51409312 Medicago truncatula
Medtr4g123593 5.0kb downstream 5.0kb downstream 8126 true chr4: 51409313-51417438 Medicago truncatula
Medtr4g123593 5.0kb downstream 5.0kb downstream 5000 false chr4: 51412439-51417438 Medicago truncatula
Medtr4g123593 10.0kb upstream 10.0kb upstream 13126 true chr4: 51399313-51412438 Medicago truncatula
Medtr4g123593 10.0kb upstream 10.0kb upstream 10000 false chr4: 51399313-51409312 Medicago truncatula
Medtr4g123593 10.0kb downstream 10.0kb downstream 13126 true chr4: 51409313-51422438 Medicago truncatula
Medtr4g123593 10.0kb downstream 10.0kb downstream 10000 false chr4: 51412439-51422438 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305664 5265 Fabidae View MSA
124067619 5270 Rosid View MSA
123736820 5271 Pentapetalae View MSA
122786957 5272 Eudicot View MSA
122047216 5273 Angiosperm View MSA
121351322 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 81.662     High  
cufflinks 19.883     High Low
cufflinks 35.313     High  
cufflinks 242.834     High High
cufflinks 23.395     High  
cufflinks 644.58     High High
cufflinks 100.123     High  
cufflinks 17.754     High Low
cufflinks 84.041     High  

0 Strain