Gene : Medtr4g127100 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31752:SF4 - AUXIN EFFLUX CARRIER COMPONENT 2 Description:  auxin efflux carrier family transporter
Genomic Order:  6758 Name:  ? Medtr4g127100
Secondary Identifier:  ? PAC:31110430
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g127100 0.5kb upstream 0.5kb upstream 3459 true chr4: 52715477-52718935 Medicago truncatula
Medtr4g127100 0.5kb upstream 0.5kb upstream 500 false chr4: 52715477-52715976 Medicago truncatula
Medtr4g127100 0.5kb downstream 0.5kb downstream 3459 true chr4: 52715977-52719435 Medicago truncatula
Medtr4g127100 0.5kb downstream 0.5kb downstream 500 false chr4: 52718936-52719435 Medicago truncatula
Medtr4g127100 1.0kb upstream 1.0kb upstream 3959 true chr4: 52714977-52718935 Medicago truncatula
Medtr4g127100 1.0kb upstream 1.0kb upstream 1000 false chr4: 52714977-52715976 Medicago truncatula
Medtr4g127100 1.0kb downstream 1.0kb downstream 3959 true chr4: 52715977-52719935 Medicago truncatula
Medtr4g127100 1.0kb downstream 1.0kb downstream 1000 false chr4: 52718936-52719935 Medicago truncatula
Medtr4g127100 2.0kb upstream 2.0kb upstream 4959 true chr4: 52713977-52718935 Medicago truncatula
Medtr4g127100 2.0kb upstream 2.0kb upstream 2000 false chr4: 52713977-52715976 Medicago truncatula
Medtr4g127100 2.0kb downstream 2.0kb downstream 4959 true chr4: 52715977-52720935 Medicago truncatula
Medtr4g127100 2.0kb downstream 2.0kb downstream 2000 false chr4: 52718936-52720935 Medicago truncatula
Medtr4g127100 5.0kb upstream 5.0kb upstream 7959 true chr4: 52710977-52718935 Medicago truncatula
Medtr4g127100 5.0kb upstream 5.0kb upstream 5000 false chr4: 52710977-52715976 Medicago truncatula
Medtr4g127100 5.0kb downstream 5.0kb downstream 7959 true chr4: 52715977-52723935 Medicago truncatula
Medtr4g127100 5.0kb downstream 5.0kb downstream 5000 false chr4: 52718936-52723935 Medicago truncatula
Medtr4g127100 10.0kb upstream 10.0kb upstream 12959 true chr4: 52705977-52718935 Medicago truncatula
Medtr4g127100 10.0kb upstream 10.0kb upstream 10000 false chr4: 52705977-52715976 Medicago truncatula
Medtr4g127100 10.0kb downstream 10.0kb downstream 12959 true chr4: 52715977-52728935 Medicago truncatula
Medtr4g127100 10.0kb downstream 10.0kb downstream 10000 false chr4: 52718936-52728935 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304711 5265 Fabidae View MSA
124063005 5270 Rosid View MSA
123747112 5271 Pentapetalae View MSA
122796951 5272 Eudicot View MSA
122046141 5273 Angiosperm View MSA
121351759 5274 Embryophyte View MSA
123382310 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.327        
cufflinks 0.013     Low  
cufflinks 0.005     Low Low
cufflinks 4.009       High
cufflinks 0.01     Low  
cufflinks 1.313        
cufflinks 4.574       High
cufflinks 0.003     Low Low
cufflinks 2.274        

0 Strain