Gene : Medtr4g127550 M. truncatula Mt4.0v1
Defline:  (1 of 32) PF02485 - Core-2/I-Branching enzyme (Branch) Description:  core-2/I-branching enzyme
Genomic Order:  6788 Name:  ? Medtr4g127550
Secondary Identifier:  ? PAC:31107718
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g127550 0.5kb upstream 0.5kb upstream 7528 true chr4: 52953958-52961485 Medicago truncatula
Medtr4g127550 0.5kb upstream 0.5kb upstream 500 false chr4: 52953958-52954457 Medicago truncatula
Medtr4g127550 0.5kb downstream 0.5kb downstream 7528 true chr4: 52954458-52961985 Medicago truncatula
Medtr4g127550 0.5kb downstream 0.5kb downstream 500 false chr4: 52961486-52961985 Medicago truncatula
Medtr4g127550 1.0kb upstream 1.0kb upstream 8028 true chr4: 52953458-52961485 Medicago truncatula
Medtr4g127550 1.0kb upstream 1.0kb upstream 1000 false chr4: 52953458-52954457 Medicago truncatula
Medtr4g127550 1.0kb downstream 1.0kb downstream 8028 true chr4: 52954458-52962485 Medicago truncatula
Medtr4g127550 1.0kb downstream 1.0kb downstream 1000 false chr4: 52961486-52962485 Medicago truncatula
Medtr4g127550 2.0kb upstream 2.0kb upstream 9028 true chr4: 52952458-52961485 Medicago truncatula
Medtr4g127550 2.0kb upstream 2.0kb upstream 2000 false chr4: 52952458-52954457 Medicago truncatula
Medtr4g127550 2.0kb downstream 2.0kb downstream 9028 true chr4: 52954458-52963485 Medicago truncatula
Medtr4g127550 2.0kb downstream 2.0kb downstream 2000 false chr4: 52961486-52963485 Medicago truncatula
Medtr4g127550 5.0kb upstream 5.0kb upstream 12028 true chr4: 52949458-52961485 Medicago truncatula
Medtr4g127550 5.0kb upstream 5.0kb upstream 5000 false chr4: 52949458-52954457 Medicago truncatula
Medtr4g127550 5.0kb downstream 5.0kb downstream 12028 true chr4: 52954458-52966485 Medicago truncatula
Medtr4g127550 5.0kb downstream 5.0kb downstream 5000 false chr4: 52961486-52966485 Medicago truncatula
Medtr4g127550 10.0kb upstream 10.0kb upstream 17028 true chr4: 52944458-52961485 Medicago truncatula
Medtr4g127550 10.0kb upstream 10.0kb upstream 10000 false chr4: 52944458-52954457 Medicago truncatula
Medtr4g127550 10.0kb downstream 10.0kb downstream 17028 true chr4: 52954458-52971485 Medicago truncatula
Medtr4g127550 10.0kb downstream 10.0kb downstream 10000 false chr4: 52961486-52971485 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307651 5265 Fabidae View MSA
124069313 5270 Rosid View MSA
123745528 5271 Pentapetalae View MSA
122791834 5272 Eudicot View MSA
122045211 5273 Angiosperm View MSA
121345766 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.077        
cufflinks 2.978        
cufflinks 3.433       High
cufflinks 2.112        
cufflinks 3.591       High
cufflinks 1.237       Low
cufflinks 2.274        
cufflinks 2.676        
cufflinks 1.57       Low

0 Strain