Gene : Medtr4g127530 M. truncatula Mt4.0v1
Defline:  (1 of 34) PF14009 - Domain of unknown function (DUF4228) (DUF4228) Description:  DUF4228 domain protein
Genomic Order:  6787 Name:  ? Medtr4g127530
Secondary Identifier:  ? PAC:31108127
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g127530 0.5kb upstream 0.5kb upstream 1264 true chr4: 52946274-52947537 Medicago truncatula
Medtr4g127530 0.5kb upstream 0.5kb upstream 500 false chr4: 52947038-52947537 Medicago truncatula
Medtr4g127530 0.5kb downstream 0.5kb downstream 1264 true chr4: 52945774-52947037 Medicago truncatula
Medtr4g127530 0.5kb downstream 0.5kb downstream 500 false chr4: 52945774-52946273 Medicago truncatula
Medtr4g127530 1.0kb upstream 1.0kb upstream 1764 true chr4: 52946274-52948037 Medicago truncatula
Medtr4g127530 1.0kb upstream 1.0kb upstream 1000 false chr4: 52947038-52948037 Medicago truncatula
Medtr4g127530 1.0kb downstream 1.0kb downstream 1764 true chr4: 52945274-52947037 Medicago truncatula
Medtr4g127530 1.0kb downstream 1.0kb downstream 1000 false chr4: 52945274-52946273 Medicago truncatula
Medtr4g127530 2.0kb upstream 2.0kb upstream 2764 true chr4: 52946274-52949037 Medicago truncatula
Medtr4g127530 2.0kb upstream 2.0kb upstream 2000 false chr4: 52947038-52949037 Medicago truncatula
Medtr4g127530 2.0kb downstream 2.0kb downstream 2764 true chr4: 52944274-52947037 Medicago truncatula
Medtr4g127530 2.0kb downstream 2.0kb downstream 2000 false chr4: 52944274-52946273 Medicago truncatula
Medtr4g127530 5.0kb upstream 5.0kb upstream 5764 true chr4: 52946274-52952037 Medicago truncatula
Medtr4g127530 5.0kb upstream 5.0kb upstream 5000 false chr4: 52947038-52952037 Medicago truncatula
Medtr4g127530 5.0kb downstream 5.0kb downstream 5764 true chr4: 52941274-52947037 Medicago truncatula
Medtr4g127530 5.0kb downstream 5.0kb downstream 5000 false chr4: 52941274-52946273 Medicago truncatula
Medtr4g127530 10.0kb upstream 10.0kb upstream 10764 true chr4: 52946274-52957037 Medicago truncatula
Medtr4g127530 10.0kb upstream 10.0kb upstream 10000 false chr4: 52947038-52957037 Medicago truncatula
Medtr4g127530 10.0kb downstream 10.0kb downstream 10764 true chr4: 52936274-52947037 Medicago truncatula
Medtr4g127530 10.0kb downstream 10.0kb downstream 10000 false chr4: 52936274-52946273 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310121 5265 Fabidae View MSA
124069920 5270 Rosid View MSA
123747179 5271 Pentapetalae View MSA
122795412 5272 Eudicot View MSA
122048681 5273 Angiosperm View MSA
121311070 5274 Embryophyte View MSA
123348418 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.232       Low
cufflinks 2.463        
cufflinks 2.202        
cufflinks 3.148        
cufflinks 3.567        
cufflinks 7.573       High
cufflinks 8.798       High
cufflinks 1.676        
cufflinks 3.03        

0 Strain