Gene : Medtr4g127360 M. truncatula Mt4.0v1
Defline:  (1 of 6) 5.3.3.12 - L-dopachrome isomerase / Tyrosinase-related protein 2 Description:  macrophage migration inhibition factor-like protein
Genomic Order:  6775 Name:  ? Medtr4g127360
Secondary Identifier:  ? PAC:31113046
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6498 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g127360 0.5kb upstream 0.5kb upstream 1585 true chr4: 52848145-52849729 Medicago truncatula
Medtr4g127360 0.5kb upstream 0.5kb upstream 500 false chr4: 52849230-52849729 Medicago truncatula
Medtr4g127360 0.5kb downstream 0.5kb downstream 1585 true chr4: 52847645-52849229 Medicago truncatula
Medtr4g127360 0.5kb downstream 0.5kb downstream 500 false chr4: 52847645-52848144 Medicago truncatula
Medtr4g127360 1.0kb upstream 1.0kb upstream 2085 true chr4: 52848145-52850229 Medicago truncatula
Medtr4g127360 1.0kb upstream 1.0kb upstream 1000 false chr4: 52849230-52850229 Medicago truncatula
Medtr4g127360 1.0kb downstream 1.0kb downstream 2085 true chr4: 52847145-52849229 Medicago truncatula
Medtr4g127360 1.0kb downstream 1.0kb downstream 1000 false chr4: 52847145-52848144 Medicago truncatula
Medtr4g127360 2.0kb upstream 2.0kb upstream 3085 true chr4: 52848145-52851229 Medicago truncatula
Medtr4g127360 2.0kb upstream 2.0kb upstream 2000 false chr4: 52849230-52851229 Medicago truncatula
Medtr4g127360 2.0kb downstream 2.0kb downstream 3085 true chr4: 52846145-52849229 Medicago truncatula
Medtr4g127360 2.0kb downstream 2.0kb downstream 2000 false chr4: 52846145-52848144 Medicago truncatula
Medtr4g127360 5.0kb upstream 5.0kb upstream 6085 true chr4: 52848145-52854229 Medicago truncatula
Medtr4g127360 5.0kb upstream 5.0kb upstream 5000 false chr4: 52849230-52854229 Medicago truncatula
Medtr4g127360 5.0kb downstream 5.0kb downstream 6085 true chr4: 52843145-52849229 Medicago truncatula
Medtr4g127360 5.0kb downstream 5.0kb downstream 5000 false chr4: 52843145-52848144 Medicago truncatula
Medtr4g127360 10.0kb upstream 10.0kb upstream 11085 true chr4: 52848145-52859229 Medicago truncatula
Medtr4g127360 10.0kb upstream 10.0kb upstream 10000 false chr4: 52849230-52859229 Medicago truncatula
Medtr4g127360 10.0kb downstream 10.0kb downstream 11085 true chr4: 52838145-52849229 Medicago truncatula
Medtr4g127360 10.0kb downstream 10.0kb downstream 10000 false chr4: 52838145-52848144 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307923 5265 Fabidae View MSA
124068416 5270 Rosid View MSA
123740780 5271 Pentapetalae View MSA
122787200 5272 Eudicot View MSA
122044871 5273 Angiosperm View MSA
121349175 5274 Embryophyte View MSA
123424544 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.814        
cufflinks 0.752        
cufflinks 0.53       Low
cufflinks 1.899        
cufflinks 0.632        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.724        
cufflinks 1.722        
cufflinks 2.918       High

0 Strain