Gene : Medtr4g127160 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23216 - NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1 Description:  SRP40, carboxy-terminal domain protein
Genomic Order:  6763 Name:  ? Medtr4g127160
Secondary Identifier:  ? PAC:31108424
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g127160 0.5kb upstream 0.5kb upstream 5282 true chr4: 52750421-52755702 Medicago truncatula
Medtr4g127160 0.5kb upstream 0.5kb upstream 500 false chr4: 52755203-52755702 Medicago truncatula
Medtr4g127160 0.5kb downstream 0.5kb downstream 5282 true chr4: 52749921-52755202 Medicago truncatula
Medtr4g127160 0.5kb downstream 0.5kb downstream 500 false chr4: 52749921-52750420 Medicago truncatula
Medtr4g127160 1.0kb upstream 1.0kb upstream 5782 true chr4: 52750421-52756202 Medicago truncatula
Medtr4g127160 1.0kb upstream 1.0kb upstream 1000 false chr4: 52755203-52756202 Medicago truncatula
Medtr4g127160 1.0kb downstream 1.0kb downstream 5782 true chr4: 52749421-52755202 Medicago truncatula
Medtr4g127160 1.0kb downstream 1.0kb downstream 1000 false chr4: 52749421-52750420 Medicago truncatula
Medtr4g127160 2.0kb upstream 2.0kb upstream 6782 true chr4: 52750421-52757202 Medicago truncatula
Medtr4g127160 2.0kb upstream 2.0kb upstream 2000 false chr4: 52755203-52757202 Medicago truncatula
Medtr4g127160 2.0kb downstream 2.0kb downstream 6782 true chr4: 52748421-52755202 Medicago truncatula
Medtr4g127160 2.0kb downstream 2.0kb downstream 2000 false chr4: 52748421-52750420 Medicago truncatula
Medtr4g127160 5.0kb upstream 5.0kb upstream 9782 true chr4: 52750421-52760202 Medicago truncatula
Medtr4g127160 5.0kb upstream 5.0kb upstream 5000 false chr4: 52755203-52760202 Medicago truncatula
Medtr4g127160 5.0kb downstream 5.0kb downstream 9782 true chr4: 52745421-52755202 Medicago truncatula
Medtr4g127160 5.0kb downstream 5.0kb downstream 5000 false chr4: 52745421-52750420 Medicago truncatula
Medtr4g127160 10.0kb upstream 10.0kb upstream 14782 true chr4: 52750421-52765202 Medicago truncatula
Medtr4g127160 10.0kb upstream 10.0kb upstream 10000 false chr4: 52755203-52765202 Medicago truncatula
Medtr4g127160 10.0kb downstream 10.0kb downstream 14782 true chr4: 52740421-52755202 Medicago truncatula
Medtr4g127160 10.0kb downstream 10.0kb downstream 10000 false chr4: 52740421-52750420 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304301 5265 Fabidae View MSA
124071277 5270 Rosid View MSA
123738497 5271 Pentapetalae View MSA
122794212 5272 Eudicot View MSA
122048501 5273 Angiosperm View MSA
121348991 5274 Embryophyte View MSA
123425594 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.467        
cufflinks 3.955        
cufflinks 6.13       High
cufflinks 1.403        
cufflinks 6.786       High
cufflinks 0.54       Low
cufflinks 2.27        
cufflinks 5.714        
cufflinks 1.309        

0 Strain