Gene : Medtr4g127150 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12309 - SEC61 GAMMA SUBUNIT Description:  protein transporter Sec61 subunit gamma-like protein
Genomic Order:  6762 Name:  ? Medtr4g127150
Secondary Identifier:  ? PAC:31114650
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g127150 0.5kb upstream 0.5kb upstream 3182 true chr4: 52745443-52748624 Medicago truncatula
Medtr4g127150 0.5kb upstream 0.5kb upstream 500 false chr4: 52748125-52748624 Medicago truncatula
Medtr4g127150 0.5kb downstream 0.5kb downstream 3182 true chr4: 52744943-52748124 Medicago truncatula
Medtr4g127150 0.5kb downstream 0.5kb downstream 500 false chr4: 52744943-52745442 Medicago truncatula
Medtr4g127150 1.0kb upstream 1.0kb upstream 3682 true chr4: 52745443-52749124 Medicago truncatula
Medtr4g127150 1.0kb upstream 1.0kb upstream 1000 false chr4: 52748125-52749124 Medicago truncatula
Medtr4g127150 1.0kb downstream 1.0kb downstream 3682 true chr4: 52744443-52748124 Medicago truncatula
Medtr4g127150 1.0kb downstream 1.0kb downstream 1000 false chr4: 52744443-52745442 Medicago truncatula
Medtr4g127150 2.0kb upstream 2.0kb upstream 4682 true chr4: 52745443-52750124 Medicago truncatula
Medtr4g127150 2.0kb upstream 2.0kb upstream 2000 false chr4: 52748125-52750124 Medicago truncatula
Medtr4g127150 2.0kb downstream 2.0kb downstream 4682 true chr4: 52743443-52748124 Medicago truncatula
Medtr4g127150 2.0kb downstream 2.0kb downstream 2000 false chr4: 52743443-52745442 Medicago truncatula
Medtr4g127150 5.0kb upstream 5.0kb upstream 7682 true chr4: 52745443-52753124 Medicago truncatula
Medtr4g127150 5.0kb upstream 5.0kb upstream 5000 false chr4: 52748125-52753124 Medicago truncatula
Medtr4g127150 5.0kb downstream 5.0kb downstream 7682 true chr4: 52740443-52748124 Medicago truncatula
Medtr4g127150 5.0kb downstream 5.0kb downstream 5000 false chr4: 52740443-52745442 Medicago truncatula
Medtr4g127150 10.0kb upstream 10.0kb upstream 12682 true chr4: 52745443-52758124 Medicago truncatula
Medtr4g127150 10.0kb upstream 10.0kb upstream 10000 false chr4: 52748125-52758124 Medicago truncatula
Medtr4g127150 10.0kb downstream 10.0kb downstream 12682 true chr4: 52735443-52748124 Medicago truncatula
Medtr4g127150 10.0kb downstream 10.0kb downstream 10000 false chr4: 52735443-52745442 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313003 5265 Fabidae View MSA
124065252 5270 Rosid View MSA
123752578 5271 Pentapetalae View MSA
122795924 5272 Eudicot View MSA
122042910 5273 Angiosperm View MSA
121349505 5274 Embryophyte View MSA
123424142 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.813        
cufflinks 6.27        
cufflinks 6.11        
cufflinks 19.214     High High
cufflinks 6.339        
cufflinks 28.104     High High
cufflinks 10.261     High  
cufflinks 5.09       Low
cufflinks 13.294     High  

0 Strain